WormBase Tree Display for Gene: WBGene00008584
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WBGene00008584 | SMap | S_parent | Sequence | F08G5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | irg-4 | Person_evidence | WBPerson9709 | |||
Sequence_name | F08G5.6 | ||||||
Molecular_name | F08G5.6 | ||||||
F08G5.6.1 | |||||||
CE05576 | |||||||
Other_name | CELE_F08G5.6 | Accession_evidence | NDB | BX284604 | |||
Public_name | irg-4 | ||||||
DB_info | Database | AceView | gene | 4N201 | |||
WormQTL | gene | WBGene00008584 | |||||
WormFlux | gene | WBGene00008584 | |||||
NDB | locus_tag | CELE_F08G5.6 | |||||
Panther | gene | CAEEL|WormBase=WBGene00008584|UniProtKB=Q19223 | |||||
family | PTHR21447 | ||||||
NCBI | gene | 184206 | |||||
RefSeq | protein | NM_069973.7 | |||||
TREEFAM | TREEFAM_ID | TF315647 | |||||
TrEMBL | UniProtAcc | Q19223 | |||||
UniProt_GCRP | UniProtAcc | Q19223 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | irg | ||||||
Allele (84) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00063974 | ||||||
00063975 | |||||||
00063976 | |||||||
00063977 | |||||||
00063978 | |||||||
00063979 | |||||||
Ortholog (31) | |||||||
Paralog (17) | |||||||
Structured_description | Concise_description | F08G5.6 encodes a CUB-like domain-containing protein; F08G5.6 is involved in the transcriptional, innate immune response towards several different bacterial pathogens; an F08G5.6::gfp promoter fusion is expressed in the intestine and in head neurons; F08G5.6 expression is positively regulated in the intestine by the ELT-2 GATA transcription factor. | Paper_evidence | WBPaper00028482 | |||
WBPaper00029438 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 19 Feb 2014 00:00:00 | ||||||
Automated_description | Involved in defense response to Gram-negative bacterium and innate immune response. Expressed in head neurons and intestine. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F08G5.6 | |||||
Corresponding_transcript | F08G5.6.1 | ||||||
Associated_feature | WBsf034363 | ||||||
WBsf646476 | |||||||
WBsf229294 | |||||||
WBsf229295 | |||||||
Experimental_info | RNAi_result | WBRNAi00012932 | Inferred_automatically | RNAi_primary | |||
WBRNAi00044057 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095405 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00065094 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095422 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030673 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00095216 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr4725 | ||||||
Expr1018962 | |||||||
Expr1148022 | |||||||
Expr2012819 | |||||||
Expr2031058 | |||||||
Drives_construct | WBCnstr00012202 | ||||||
WBCnstr00019358 | |||||||
WBCnstr00032855 | |||||||
Construct_product | WBCnstr00012202 | ||||||
WBCnstr00015896 | |||||||
WBCnstr00032855 | |||||||
Microarray_results (17) | |||||||
Expression_cluster (397) | |||||||
Interaction (31) | |||||||
WBProcess | WBbiopr:00000039 | ||||||
Map_info | Positive | Positive_clone | F08G5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | IV | 5.92969 | |||||
Reference (16) | |||||||
Method | Gene |