WormBase Tree Display for Gene: WBGene00008459
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| WBGene00008459 | SMap | S_parent | Sequence | E02H1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | mrpl-53 | Person_evidence | WBPerson261 | |||||
| Sequence_name | E02H1.8 | ||||||||
| Molecular_name | E02H1.8 | ||||||||
| E02H1.8.1 | |||||||||
| CE34789 | |||||||||
| Other_name | CELE_E02H1.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | mrpl-53 | ||||||||
| DB_info | Database | AceView | gene | 2J889 | |||||
| WormQTL | gene | WBGene00008459 | |||||||
| WormFlux | gene | WBGene00008459 | |||||||
| NDB | locus_tag | CELE_E02H1.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008459|UniProtKB=Q7YX52 | |||||||
| family | PTHR33618 | ||||||||
| NCBI | gene | 3565796 | |||||||
| RefSeq | protein | NM_001026887.4 | |||||||
| TREEFAM | TREEFAM_ID | TF300292 | |||||||
| TrEMBL | UniProtAcc | Q7YX52 | |||||||
| UniProt_GCRP | UniProtAcc | Q7YX52 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Jun 2011 16:50:10 | WBPerson2970 | Name_change | CGC_name | mrpl-53 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | mrpl | ||||||||
| Allele (15) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00082826 | ||||||||
| 00082827 | |||||||||
| Contained_in_operon | CEOP2436 | ||||||||
| Ortholog (32) | |||||||||
| Paralog | WBGene00021920 | ||||||||
| Structured_description | Automated_description | Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Is an ortholog of human MRPL53 (mitochondrial ribosomal protein L53). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | E02H1.8 | |||||||
| Corresponding_transcript | E02H1.8.1 | ||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf221908 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00007974 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012646 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028418 | ||||||||
| Expr1033685 | |||||||||
| Expr1147594 | |||||||||
| Expr2013729 | |||||||||
| Expr2031964 | |||||||||
| Drives_construct | WBCnstr00032948 | ||||||||
| Construct_product | WBCnstr00032948 | ||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction | WBInteraction000541548 | ||||||||
| WBInteraction000556463 | |||||||||
| Map_info | Map | II | Position | 1.61607 | Error | 4e-05 | |||
| Positive | Positive_clone | E02H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065394 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
