WormBase Tree Display for Gene: WBGene00008458
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| WBGene00008458 | SMap | S_parent | Sequence | E02H1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | E02H1.6 | |||||||
| Molecular_name | E02H1.6 | ||||||||
| E02H1.6.1 | |||||||||
| CE28286 | |||||||||
| Other_name | CELE_E02H1.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | E02H1.6 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (18) | |||||||||
| Strain | WBStrain00037116 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Contained_in_operon | CEOP2436 | ||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00006391 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Concise_description | E02H1.6 encodes an ortholog of human TAF9 (OMIM:600822; also known asAK6, adrenal gland protein AD-004 like protein, ADLP) and of S.cerevisiae Fap7p; like its human ortholog, E02H1.6 is nuclear, and ispredicted to likewise be a TATA box binding protein (TBP)-associatedfactor mediating activation of RNA polymerase II; E02H1.6 prefers ATPand dATP as phosphate donors; E02H1.6's biochemical activity is unusual,since it also prefers AMP and dAMP as substrates, and tolerates CMP, TMPand shikimate acid as substrates as well; since yeast Fap7p promotespre-rRNA cleavage, E02H1.6 may be multifunctional; in RNAi assays,E02H1.6 is required for normally fast growth; E02H1.6 is coexpressedwith pme-2 in an operon, and thus, like PME-2, may function in DNArepair. | Paper_evidence | WBPaper00005600 | |||||
| WBPaper00027687 | |||||||||
| WBPaper00028896 | |||||||||
| WBPaper00028897 | |||||||||
| WBPaper00028898 | |||||||||
| WBPaper00028899 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 20 Feb 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP binding activity and adenylate kinase activity. Predicted to be involved in nucleoside monophosphate phosphorylation and phosphorylation. Predicted to be located in cytoplasm and nucleus. Is an ortholog of human AK6 (adenylate kinase 6). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | E02H1.6 | |||||||
| Corresponding_CDS_history | E02H1.6:wp54 | ||||||||
| Corresponding_transcript | E02H1.6.1 | ||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf221907 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00007974 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012646 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00065873 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043602 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030468 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4325 | ||||||||
| Expr1020050 | |||||||||
| Expr1033684 | |||||||||
| Expr1147592 | |||||||||
| Expr2002134 | |||||||||
| Expr2020357 | |||||||||
| Drives_construct | WBCnstr00011923 | ||||||||
| WBCnstr00032949 | |||||||||
| Construct_product | WBCnstr00011923 | ||||||||
| WBCnstr00032949 | |||||||||
| Antibody | WBAntibody00001104 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (99) | |||||||||
| Interaction (101) | |||||||||
| Map_info | Positive | Positive_clone | E02H1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 1.61605 | |||||||
| Reference | WBPaper00027687 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065308 | |||||||||
| Method | Gene |
