WormBase Tree Display for Gene: WBGene00008457
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| WBGene00008457 | SMap | S_parent | Sequence | E02H1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | E02H1.5 | |||||||
| Molecular_name | E02H1.5 | ||||||||
| E02H1.5.1 | |||||||||
| CE01540 | |||||||||
| Other_name | CELE_E02H1.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | E02H1.5 | ||||||||
| DB_info | Database | AceView | gene | 2J885 | |||||
| WormQTL | gene | WBGene00008457 | |||||||
| WormFlux | gene | WBGene00008457 | |||||||
| NDB | locus_tag | CELE_E02H1.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008457|UniProtKB=Q09526 | |||||||
| family | PTHR15924 | ||||||||
| NCBI | gene | 174510 | |||||||
| RefSeq | protein | NM_001383918.2 | |||||||
| SwissProt | UniProtAcc | Q09526 | |||||||
| TREEFAM | TREEFAM_ID | TF323606 | |||||||
| UniProt_GCRP | UniProtAcc | Q09526 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| Strain | WBStrain00037116 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00054553 | ||||||||
| 00054554 | |||||||||
| 00054555 | |||||||||
| Contained_in_operon | CEOP2436 | ||||||||
| Ortholog (31) | |||||||||
| Structured_description | Concise_description | E02H1.5 encodes an ortholog of human CLE/CGI-99/C14orf166, a putativetranscription factor that binds ninein and is overexpressed in braintumors; E02H1.5 is coexpressed with pme-2 in an operon, and thus, likePME-2, may function in DNA repair. | Paper_evidence | WBPaper00005600 | |||||
| WBPaper00029105 | |||||||||
| WBPaper00029106 | |||||||||
| WBPaper00029107 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 20 Feb 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in tRNA splicing, via endonucleolytic cleavage and ligation. Predicted to be part of tRNA-splicing ligase complex. Is an ortholog of human RTRAF (RNA transcription, translation and transport factor). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | E02H1.5 | |||||||
| Corresponding_transcript | E02H1.5.1 | ||||||||
| Other_sequence | Acan_isotig06634 | ||||||||
| CJC08052_1 | |||||||||
| CBC05528_1 | |||||||||
| Name_isotig02575 | |||||||||
| Associated_feature | WBsf221906 | ||||||||
| Transcription_factor | WBTranscriptionFactor000226 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00030467 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043601 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062186 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012645 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024074 | ||||||||
| Expr1033683 | |||||||||
| Expr1147591 | |||||||||
| Expr2002133 | |||||||||
| Expr2020356 | |||||||||
| Drives_construct | WBCnstr00032950 | ||||||||
| Construct_product | WBCnstr00032950 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (85) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Positive | Positive_clone | E02H1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 1.61602 | |||||||
| Reference | WBPaper00029105 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
