WormBase Tree Display for Gene: WBGene00008457

WBGene00008457 SMap: S_parent: Sequence: E02H1
  Identity: Version: 1
    Name: Sequence_name: E02H1.5
      Molecular_name: E02H1.5
        E02H1.5.1
        CE01540
      Other_name: CELE_E02H1.5 Accession_evidence: NDB BX284602
      Public_name: E02H1.5
    DB_info: Database: AceView gene 2J885
        WormQTL gene WBGene00008457
        WormFlux gene WBGene00008457
        NDB locus_tag CELE_E02H1.5
        Panther gene CAEEL|WormBase=WBGene00008457|UniProtKB=Q09526
          family PTHR15924
        NCBI gene 174510
        RefSeq protein NM_001383918.2
        SwissProt UniProtAcc Q09526
        TREEFAM TREEFAM_ID TF323606
        UniProt_GCRP UniProtAcc Q09526
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (23)
    Strain: WBStrain00037116
    RNASeq_FPKM (74)
    GO_annotation: 00054553
      00054554
      00054555
    Contained_in_operon: CEOP2436
    Ortholog: WBGene00024262 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00061487 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00160127 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00152510 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00120076 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00223359 Brugia malayi From_analysis: WormBase-Compara
      CSP26.g2159 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g193 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g1100 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g3056 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g1508 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g3533 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g20466 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP39.g27116 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g3220 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-E02H1.5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold50.g311 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_02292.g25833 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_08452 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_003698 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g02557 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_20190230 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrII_pilon.g5538 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00248059 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00302906 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0051249 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
            PhylomeDB
      ZFIN:ZDB-GENE-040426-1082 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:23169 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:1915295 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1304704 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      RGD:1565933 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
    Structured_description: Concise_description: E02H1.5 encodes an ortholog of human CLE/CGI-99/C14orf166, a putativetranscription factor that binds ninein and is overexpressed in braintumors; E02H1.5 is coexpressed with pme-2 in an operon, and thus, likePME-2, may function in DNA repair. Paper_evidence: WBPaper00005600
            WBPaper00029105
            WBPaper00029106
            WBPaper00029107
          Curator_confirmed: WBPerson567
          Date_last_updated: 20 Feb 2007 00:00:00
      Automated_description: Predicted to enable RNA binding activity. Predicted to be involved in tRNA splicing, via endonucleolytic cleavage and ligation. Predicted to be part of tRNA-splicing ligase complex. Is an ortholog of human RTRAF (RNA transcription, translation and transport factor). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: E02H1.5
    Corresponding_transcript: E02H1.5.1
    Other_sequence: Acan_isotig06634
      CJC08052_1
      CBC05528_1
      Name_isotig02575
    Associated_feature: WBsf221906
    Transcription_factor: WBTranscriptionFactor000226
  Experimental_info: RNAi_result: WBRNAi00030467 Inferred_automatically: RNAi_primary
      WBRNAi00043601 Inferred_automatically: RNAi_primary
      WBRNAi00062186 Inferred_automatically: RNAi_primary
      WBRNAi00012645 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1024074
      Expr1033683
      Expr1147591
      Expr2002133
      Expr2020356
    Drives_construct: WBCnstr00032950
    Construct_product: WBCnstr00032950
    Microarray_results (19)
    Expression_cluster (85)
    Interaction (14)
  Map_info: Positive: Positive_clone: E02H1 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 1.61602
  Reference: WBPaper00029105
    WBPaper00038491
    WBPaper00055090
  Method: Gene