WormBase Tree Display for Gene: WBGene00008310
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| WBGene00008310 | SMap | S_parent | Sequence | C54E10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C54E10.6 | |||||||
| Molecular_name | C54E10.6 | ||||||||
| C54E10.6.1 | |||||||||
| CE15734 | |||||||||
| Other_name | CELE_C54E10.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C54E10.6 | ||||||||
| DB_info | Database | AceView | gene | 5T288 | |||||
| WormQTL | gene | WBGene00008310 | |||||||
| WormFlux | gene | WBGene00008310 | |||||||
| NDB | locus_tag | CELE_C54E10.6 | |||||||
| NCBI | gene | 180228 | |||||||
| RefSeq | protein | NM_075274.4 | |||||||
| TrEMBL | UniProtAcc | O45316 | |||||||
| UniProt_GCRP | UniProtAcc | O45316 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (23) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00138016 | Caenorhabditis japonica | From_analysis | OMA | |||||
| Inparanoid_8 | |||||||||
| WBGene00126537 | Caenorhabditis japonica | From_analysis | OMA | ||||||
| Inparanoid_8 | |||||||||
| WBGene00139457 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
| WBGene00087088 | Caenorhabditis briggsae | From_analysis | Inparanoid_8 | ||||||
| chrV_pilon.g17775 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in several structures, including head mesodermal cell; muscle cell; neurons; rectal muscle; and ventral nerve cord based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; pgl-1; and lin-35 based on microarray; tiling array; and RNA-seq studies. Is affected by thirteen chemicals including 1-methylnicotinamide; Alovudine; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C54E10.6 | |||||||
| Corresponding_transcript | C54E10.6.1 | ||||||||
| Other_sequence | MP01441 | ||||||||
| MA01100 | |||||||||
| Associated_feature | WBsf653545 | ||||||||
| WBsf1003014 | |||||||||
| WBsf1003015 | |||||||||
| WBsf1003016 | |||||||||
| WBsf1021552 | |||||||||
| WBsf1021553 | |||||||||
| WBsf1021554 | |||||||||
| WBsf235196 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000783 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030144 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012395 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043153 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021200 | ||||||||
| Expr1033600 | |||||||||
| Expr1147127 | |||||||||
| Expr2001921 | |||||||||
| Expr2020144 | |||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction | WBInteraction000218171 | ||||||||
| WBInteraction000218172 | |||||||||
| WBInteraction000218173 | |||||||||
| WBInteraction000218174 | |||||||||
| WBInteraction000218175 | |||||||||
| WBInteraction000250939 | |||||||||
| WBInteraction000371729 | |||||||||
| WBInteraction000383276 | |||||||||
| WBInteraction000561539 | |||||||||
| Map_info | Positive | Positive_clone | C54E10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 18.0114 | |||||||
| Method | Gene |
