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WormBase Tree Display for Gene: WBGene00008290

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Name Class

WBGene00008290SMapS_parentSequenceC54C8
IdentityVersion2
NameCGC_namebgnt-1.8Person_evidenceWBPerson2136
WBPerson5364
Sequence_nameC54C8.2
Molecular_nameC54C8.2
C54C8.2.1
CE42854
Other_nameCELE_C54C8.2Accession_evidenceNDBBX284601
Public_namebgnt-1.8
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
209 Oct 2015 09:56:12WBPerson2970Name_changeCGC_namebgnt-1.8
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classbgnt
Allele (32)
RNASeq_FPKM (74)
Ortholog (33)
ParalogWBGene00009032Caenorhabditis elegansFrom_analysisInparanoid_8
Panther
WormBase-Compara
WBGene00010167Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00008491Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00010694Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00017723Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00011779Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00015982Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00010716Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
Structured_descriptionAutomated_descriptionExpressed in seam cell. Human ortholog(s) of this gene implicated in congenital muscular dystrophy-dystroglycanopathy type A13. Human B4GAT1 enables glucuronosyltransferase activity. Is predicted to encode a protein with the following domain: Glycosyl-transferase for dystroglycan. Is an ortholog of human B4GAT1 (beta-1,4-glucuronyltransferase 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoPotential_modelDOID:0111238Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:15685)
Molecular_infoCorresponding_CDSC54C8.2
Corresponding_transcriptC54C8.2.1
Other_sequenceHO058605.1
Associated_featureWBsf218592
Experimental_infoRNAi_resultWBRNAi00116193Inferred_automaticallyRNAi_primary
WBRNAi00030129Inferred_automaticallyRNAi_primary
WBRNAi00043119Inferred_automaticallyRNAi_primary
WBRNAi00116211Inferred_automaticallyRNAi_primary
WBRNAi00003220Inferred_automaticallyRNAi_primary
Expr_patternExpr7485
Expr1023013
Expr1147088
Drives_constructWBCnstr00012629
WBCnstr00033079
Construct_productWBCnstr00033079
Microarray_results (14)
Expression_clusterWBPaper00037624:ets-4(ok165)_downregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00041954:ethanol_upregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044760:somatic_specific
WBPaper00045017:blmp-1(tm548)_downregulated
WBPaper00045390:tunicamycin_upregulated
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045774:clk-1_upregulated
WBPaper00045934:wrn-1(gk99)_upregulated
WBPaper00046887:WNT-target
WBPaper00049018:swsn-2.2(RNAi)_upregulated
WBPaper00050080:rbr-2(tm3141)_downregulated
WBPaper00050370:dpy-21(e428)_L3_downregulated
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00053295:lin-22(icb38)_downregulated
WBPaper00053295:lin-22(ot267)_upregulated
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053388:dauer_regulated_Cluster6
WBPaper00053402:cco-1(RNAi)_downregulated
WBPaper00053909:N2_vs_CB4856_upregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055013:spt-16(RNAi)_downregulated
WBPaper00055226:adr-1(tm668)_upregulated
WBPaper00056169:rrf-3(pk1426)_downregulated_L3
WBPaper00056169:rrf-3(pk1426)_downregulated_L4
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056290:mdt-15(mg584)_upregulated
WBPaper00056868:P.aeruginosa_upregulated_smallRNA
WBPaper00057068:ints-4(RNAi)_downregulated
WBPaper00057068:ints-4(RNAi)_downregulated_Cadmium
WBPaper00058969:RIS_depleted
WBPaper00059117:B.subtilis_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00060445:ikb-1(nr2027)_downregulated_L4
WBPaper00060445:nfki-1(cer1)_downregulated_L4
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00061341:28C_48h_upregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061527:F28G4.4-ZK829.3_6652
WBPaper00062156:jmjd-1.2(zr1010)_upregulated
WBPaper00062156:jmjd-5(zr1234)_upregulated
WBPaper00062347:blmp-1(tm548)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00064107:lin-35(n745)_downregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_upregulated
WBPaper00064602:egl-9(sa307)_downregulated
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065005:sams-3(RNAi)_upregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_23
WBPaper00024393:strongly_regulated_dauer_genes
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00027111:rde-3(ne298)_upregulated
WBPaper00036286:Pattern_G
WBPaper00040116:pRJ-FR.5_down_regulated
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040858:eQTL_regulated_developing
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_51h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045294:50uM_DBAA_downregulated
WBPaper00046083:oga-1(ok1207)_OP50_downregulated
WBPaper00046083:ogt-1(ok1474)_OP50_downregulated
WBPaper00046083:pmk-1(km25)_OP50_downregulated
WBPaper00047070:N2_starvation_downregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00047070:xpa-1_UV_downregulated
Interaction (123)
Map_infoPositivePositive_cloneC54C8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI13.2212
ReferenceWBPaper00038491
WBPaper00055090
WBPaper00065080
MethodGene