WormBase Tree Display for Gene: WBGene00008283
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| WBGene00008283 | SMap | S_parent | Sequence | C53D6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C53D6.6 | |||||||
| Molecular_name | C53D6.6 | ||||||||
| C53D6.6.1 | |||||||||
| CE05491 | |||||||||
| C53D6.6.2 | |||||||||
| Other_name | CELE_C53D6.6 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C53D6.6 | ||||||||
| DB_info | Database | AceView | gene | 4J792 | |||||
| WormQTL | gene | WBGene00008283 | |||||||
| WormFlux | gene | WBGene00008283 | |||||||
| NDB | locus_tag | CELE_C53D6.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008283|UniProtKB=Q18809 | |||||||
| family | PTHR46169 | ||||||||
| NCBI | gene | 177720 | |||||||
| RefSeq | protein | NM_069169.5 | |||||||
| TrEMBL | UniProtAcc | Q18809 | |||||||
| UniProt_GCRP | UniProtAcc | Q18809 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (40) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00062415 | ||||||||
| 00062416 | |||||||||
| 00062417 | |||||||||
| 00062418 | |||||||||
| 00062419 | |||||||||
| 00116231 | |||||||||
| Ortholog (44) | |||||||||
| Paralog | WBGene00010704 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00015662 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00009133 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00015247 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable protein dimerization activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Is an ortholog of human ZBED1 (zinc finger BED-type containing 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53D6.6 | |||||||
| Corresponding_transcript | C53D6.6.1 | ||||||||
| C53D6.6.2 | |||||||||
| Associated_feature | WBsf652032 | ||||||||
| WBsf652033 | |||||||||
| WBsf997339 | |||||||||
| WBsf997340 | |||||||||
| WBsf997341 | |||||||||
| WBsf1017913 | |||||||||
| WBsf1017914 | |||||||||
| WBsf230499 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030121 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012367 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043102 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017850 | ||||||||
| Expr1033597 | |||||||||
| Expr1147068 | |||||||||
| Expr2001898 | |||||||||
| Expr2020122 | |||||||||
| Drives_construct | WBCnstr00033086 | ||||||||
| Construct_product | WBCnstr00033086 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (108) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Positive | Positive_clone | C53D6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 4.0147 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
