WormBase Tree Display for Gene: WBGene00008215
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| WBGene00008215 | SMap | S_parent | Sequence | C49F8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C49F8.3 | |||||||
| Molecular_name | C49F8.3 | ||||||||
| C49F8.3.1 | |||||||||
| CE05458 | |||||||||
| Other_name | CELE_C49F8.3 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | C49F8.3 | ||||||||
| DB_info | Database | AceView | gene | XO4 | |||||
| WormQTL | gene | WBGene00008215 | |||||||
| WormFlux | gene | WBGene00008215 | |||||||
| NDB | locus_tag | CELE_C49F8.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008215|UniProtKB=Q18709 | |||||||
| family | PTHR21679 | ||||||||
| NCBI | gene | 181459 | |||||||
| RefSeq | protein | NM_077825.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315315 | |||||||
| TrEMBL | UniProtAcc | Q18709 | |||||||
| UniProt_GCRP | UniProtAcc | Q18709 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00020083 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00022033 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00302974 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in PLM; germline precursor cell; hypodermis; seam cell; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-two chemicals including methylmercury hydroxide; 1-methylnicotinamide; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C49F8.3 | |||||||
| Corresponding_transcript | C49F8.3.1 | ||||||||
| Other_sequence (44) | |||||||||
| Associated_feature | WBsf654521 | ||||||||
| WBsf717389 | |||||||||
| WBsf1007601 | |||||||||
| WBsf1007602 | |||||||||
| WBsf1007603 | |||||||||
| WBsf1024226 | |||||||||
| WBsf238130 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012151 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042817 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029985 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019452 | ||||||||
| Expr1033569 | |||||||||
| Expr1146797 | |||||||||
| Expr2001783 | |||||||||
| Expr2020010 | |||||||||
| Drives_construct | WBCnstr00033147 | ||||||||
| Construct_product | WBCnstr00033147 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (245) | |||||||||
| Interaction (23) | |||||||||
| Map_info | Positive | Positive_clone | C49F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | 11.8234 | |||||||
| Reference | WBPaper00060275 | ||||||||
| WBPaper00064898 | |||||||||
| Method | Gene |
