WormBase Tree Display for Gene: WBGene00008215
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WBGene00008215 | SMap | S_parent | Sequence | C49F8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C49F8.3 | |||||||
Molecular_name | C49F8.3 | ||||||||
C49F8.3.1 | |||||||||
CE05458 | |||||||||
Other_name | CELE_C49F8.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | C49F8.3 | ||||||||
DB_info | Database | AceView | gene | XO4 | |||||
WormQTL | gene | WBGene00008215 | |||||||
WormFlux | gene | WBGene00008215 | |||||||
NDB | locus_tag | CELE_C49F8.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008215|UniProtKB=Q18709 | |||||||
family | PTHR21679 | ||||||||
NCBI | gene | 181459 | |||||||
RefSeq | protein | NM_077825.7 | |||||||
TREEFAM | TREEFAM_ID | TF315315 | |||||||
TrEMBL | UniProtAcc | Q18709 | |||||||
UniProt_GCRP | UniProtAcc | Q18709 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (24) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (26) | |||||||||
Paralog | WBGene00020083 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00022033 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00302974 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in PLM; germline precursor cell; hypodermis; seam cell; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-two chemicals including methylmercury hydroxide; 1-methylnicotinamide; and rotenone based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: DB module and Domain of unknown function DB. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C49F8.3 | |||||||
Corresponding_transcript | C49F8.3.1 | ||||||||
Other_sequence (44) | |||||||||
Associated_feature | WBsf654521 | ||||||||
WBsf717389 | |||||||||
WBsf1007601 | |||||||||
WBsf1007602 | |||||||||
WBsf1007603 | |||||||||
WBsf1024226 | |||||||||
WBsf238130 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012151 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00042817 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029985 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019452 | ||||||||
Expr1033569 | |||||||||
Expr1146797 | |||||||||
Expr2001783 | |||||||||
Expr2020010 | |||||||||
Drives_construct | WBCnstr00033147 | ||||||||
Construct_product | WBCnstr00033147 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (245) | |||||||||
Interaction | WBInteraction000235712 | ||||||||
WBInteraction000248279 | |||||||||
WBInteraction000255797 | |||||||||
WBInteraction000258665 | |||||||||
WBInteraction000260392 | |||||||||
WBInteraction000330393 | |||||||||
WBInteraction000376170 | |||||||||
WBInteraction000395596 | |||||||||
WBInteraction000397593 | |||||||||
WBInteraction000400082 | |||||||||
WBInteraction000407153 | |||||||||
WBInteraction000408176 | |||||||||
WBInteraction000412761 | |||||||||
WBInteraction000418590 | |||||||||
WBInteraction000426463 | |||||||||
WBInteraction000429464 | |||||||||
WBInteraction000430189 | |||||||||
WBInteraction000452253 | |||||||||
WBInteraction000457524 | |||||||||
WBInteraction000458268 | |||||||||
WBInteraction000553176 | |||||||||
WBInteraction000568227 | |||||||||
WBInteraction000578271 | |||||||||
Map_info | Positive | Positive_clone | C49F8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | X | 11.8234 | |||||||
Reference | WBPaper00060275 | ||||||||
WBPaper00064898 | |||||||||
Method | Gene |