WormBase Tree Display for Gene: WBGene00008028

WBGene00008028 SMap: S_parent: Sequence: C39E9
  Identity: Version: 2
    Name: CGC_name: scl-6 Person_evidence: WBPerson261
      Sequence_name: C39E9.4
      Molecular_name: C39E9.4
        C39E9.4.1
        CE05387
      Other_name: CELE_C39E9.4 Accession_evidence: NDB BX284604
      Public_name: scl-6
    DB_info: Database: AceView gene 4N833
        WormQTL gene WBGene00008028
        WormFlux gene WBGene00008028
        NDB locus_tag CELE_C39E9.4
        Panther gene CAEEL|WormBase=WBGene00008028|UniProtKB=Q18538
          family PTHR10334
        NCBI gene 183343
        RefSeq protein NM_070107.2
        TREEFAM TREEFAM_ID TF352352
        TrEMBL UniProtAcc Q18538
        UniProt_GCRP UniProtAcc Q18538
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 07 Nov 2007 11:51:23 WBPerson2970 Name_change: CGC_name: scl-6
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: scl
    Allele (27)
    RNASeq_FPKM (74)
    GO_annotation: 00061604
    Ortholog (58)
    Paralog (32)
    Structured_description: Concise_description: scl-6 encodes a predicted extracellular protein that is a member of the C. elegans family of SCP/TAPS domain-containing proteins. Curator_confirmed: WBPerson1843
          Date_last_updated: 26 Mar 2008 00:00:00
      Automated_description: Predicted to be located in extracellular space. Is an ortholog of human PI15 (peptidase inhibitor 15). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C39E9.4
    Corresponding_transcript: C39E9.4.1
    Other_sequence: CSC00663_1
      FD516516.1
    Associated_feature: WBsf646508
      WBsf229376
      WBsf229377
  Experimental_info: RNAi_result: WBRNAi00011789 Inferred_automatically: RNAi_primary
      WBRNAi00042222 Inferred_automatically: RNAi_primary
      WBRNAi00029690 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012914
      Expr1146213
      Expr2015641
      Expr2033875
    Drives_construct: WBCnstr00033295
      WBCnstr00042226
    Construct_product: WBCnstr00033295
      WBCnstr00042226
    Microarray_results (17)
    Expression_cluster (170)
    Interaction: WBInteraction000031657
      WBInteraction000123095
      WBInteraction000123096
      WBInteraction000186491
      WBInteraction000308966
      WBInteraction000308967
      WBInteraction000335203
      WBInteraction000401158
      WBInteraction000405451
  Map_info: Map: IV Position: 7.75383 Error: 0.009868
    Positive: Positive_clone: C39E9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033099
    WBPaper00038491
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene