WormBase Tree Display for Gene: WBGene00007844
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WBGene00007844 | SMap | S_parent | Sequence | C31E10 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | irld-24 | Person_evidence | WBPerson260 | |||||
Sequence_name | C31E10.3 | ||||||||
Molecular_name | C31E10.3a | ||||||||
C31E10.3a.1 | |||||||||
CE53390 | |||||||||
C31E10.3b | |||||||||
CE08504 | |||||||||
C31E10.3b.1 | |||||||||
Other_name | CELE_C31E10.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | irld-24 | ||||||||
DB_info | Database | AceView | gene | XO605 | |||||
WormQTL | gene | WBGene00007844 | |||||||
WormFlux | gene | WBGene00007844 | |||||||
NDB | locus_tag | CELE_C31E10.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007844|UniProtKB=Q93312 | |||||||
family | PTHR21662 | ||||||||
NCBI | gene | 183087 | |||||||
RefSeq | protein | NM_077931.5 | |||||||
NM_001373563.3 | |||||||||
TrEMBL | UniProtAcc | A0A4V0IKJ5 | |||||||
Q93313 | |||||||||
UniProt_GCRP | UniProtAcc | A0A4V0IKJ5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-24 | ||||
3 | 20 May 2019 15:21:47 | WBPerson4025 | Event | Acquires_merge | WBGene00007845 | ||||
Acquires_merge | WBGene00007845 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | irld | ||||||||
Allele (77) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (61) | |||||||||
Paralog (75) | |||||||||
Structured_description | Automated_description | Enriched in SMBDL; SMBDR; SMBVL; SMBVR; and neurons based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and elt-2 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including tryptophan; Psoralens; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C31E10.3a | |||||||
C31E10.3b | |||||||||
Corresponding_CDS_history | C31E10.3:wp57 | ||||||||
C31E10.3:wp271 | |||||||||
Corresponding_transcript | C31E10.3a.1 | ||||||||
C31E10.3b.1 | |||||||||
Associated_feature | WBsf1007793 | ||||||||
WBsf1007794 | |||||||||
Experimental_info | RNAi_result | WBRNAi00041612 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011438 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00041611 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00011439 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00029384 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020917 | ||||||||
Expr1026535 | |||||||||
Expr1145636 | |||||||||
Expr1145637 | |||||||||
Expr2001278 | |||||||||
Expr2019500 | |||||||||
Drives_construct | WBCnstr00033439 | ||||||||
WBCnstr00033440 | |||||||||
Construct_product | WBCnstr00033439 | ||||||||
WBCnstr00033440 | |||||||||
Microarray_results (32) | |||||||||
Expression_cluster (62) | |||||||||
Interaction | WBInteraction000317507 | ||||||||
WBInteraction000363537 | |||||||||
WBInteraction000433114 | |||||||||
WBInteraction000439790 | |||||||||
WBInteraction000452501 | |||||||||
WBInteraction000461672 | |||||||||
Map_info | Map | X | Position | 15.9255 | |||||
Positive | Positive_clone | C31E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |