WormBase Tree Display for Gene: WBGene00007842
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| WBGene00007842 | SMap | S_parent | Sequence | C31E10 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | C31E10.1 | ||||||||
| Molecular_name | C31E10.1 | |||||||||
| Other_name | CELE_C31E10.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | C31E10.1 | |||||||||
| DB_info | Database | AceView | gene | XO604 | ||||||
| XO602 | ||||||||||
| WormQTL | gene | WBGene00007842 | ||||||||
| WormFlux | gene | WBGene00007842 | ||||||||
| NDB | locus_tag | CELE_C31E10.1 | ||||||||
| NCBI | gene | 183085 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 20 May 2019 14:52:17 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (29) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00099628 | Pristionchus pacificus | From_analysis | OMA | ||||||
| WBGene00065334 | Caenorhabditis remanei | From_analysis | OMA | |||||||
| TreeFam | ||||||||||
| Inparanoid_8 | ||||||||||
| WBGene00045334 | Caenorhabditis briggsae | From_analysis | OMA | |||||||
| Inparanoid_8 | ||||||||||
| WBGene00144530 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00135736 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Paralog (221) | ||||||||||
| Structured_description | Automated_description | Enriched in head mesodermal cell and neurons based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including rrf-3; eat-2; and sir-2.1 based on tiling array; RNA-seq; and microarray studies. Is affected by six chemicals including Psoralens; allantoin; and metformin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | C31E10.1:wp271 | ||||||||
| Corresponding_pseudogene | C31E10.1 | |||||||||
| Experimental_info | Expr_pattern | Expr1017318 | ||||||||
| Expr1145635 | ||||||||||
| Expr2001277 | ||||||||||
| Expr2019499 | ||||||||||
| Drives_construct | WBCnstr00033441 | |||||||||
| Construct_product | WBCnstr00033441 | |||||||||
| Microarray_results (16) | ||||||||||
| Expression_cluster (37) | ||||||||||
| Interaction (15) | ||||||||||
| Map_info | Positive | Positive_clone | C31E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | X | 15.918 | ||||||||
| Method | Gene |
