WormBase Tree Display for Gene: WBGene00007807

WBGene00007807 SMap: S_parent: Sequence: C29F3
  Identity: Version: 1
    Name: Sequence_name: C29F3.7
      Molecular_name: C29F3.7a
        C29F3.7a.1
        CE31888
        C29F3.7b
        CE40917
        C29F3.7b.1
      Other_name: CELE_C29F3.7 Accession_evidence: NDB BX284605
      Public_name: C29F3.7
    DB_info: Database: AceView gene 5P837
        WormQTL gene WBGene00007807
        WormFlux gene WBGene00007807
        NDB locus_tag CELE_C29F3.7
        Panther gene CAEEL|WormBase=WBGene00007807|UniProtKB=O17616
          family PTHR47407
        NCBI gene 180036
        RefSeq protein NM_171555.7
            NM_001129398.4
        TREEFAM TREEFAM_ID TF316078
        TrEMBL UniProtAcc A5JYV2
            O17616
        UniProt_GCRP UniProtAcc O17616
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (65)
    RNASeq_FPKM (74)
    GO_annotation: 00030131
      00030132
    Ortholog: WBGene00072853 Caenorhabditis remanei From_analysis: OMA
            WormBase-Compara
      WBGene00036012 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
      WBGene00036013 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00042510 Caenorhabditis briggsae From_analysis: OrthoMCL
      WBGene00036011 Caenorhabditis briggsae From_analysis: OMA
            WormBase-Compara
      WBGene00161562 Caenorhabditis brenneri From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00079383 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
      WBGene00081996 Caenorhabditis remanei From_analysis: OMA
            WormBase-Compara
      WBGene00142581 Caenorhabditis brenneri From_analysis: OMA
            WormBase-Compara
      WBGene00142745 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            WormBase-Compara
      WBGene00149780 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00079385 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00161105 Caenorhabditis brenneri From_analysis: Inparanoid_8
            WormBase-Compara
      WBGene00148221 Caenorhabditis brenneri From_analysis: Inparanoid_8
      WBGene00041129 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00063726 Caenorhabditis remanei From_analysis: Inparanoid_8
      WBGene00147499 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00148147 Caenorhabditis brenneri From_analysis: WormBase-Compara
      WBGene00164838 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g11444 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g15852 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g2236 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g2237 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP31.g3674 Caenorhabditis uteleia From_analysis: WormBase-Compara
      Cang_2012_03_13_00161.g5960 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_V.g21325 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g21327 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g21328 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Cnig_chr_V.g21330 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g16265 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp11.Scaffold629.g16266 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00772.g15334 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_00772.g15335 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_03491.g30367 Caenorhabditis sinica From_analysis: WormBase-Compara
      Csp5_scaffold_06166.g36164 Caenorhabditis sinica From_analysis: WormBase-Compara
      GCK72_015656 Caenorhabditis remanei From_analysis: WormBase-Compara
      GCK72_020865 Caenorhabditis remanei From_analysis: WormBase-Compara
      Pan_g12996 Panagrellus redivivus From_analysis: WormBase-Compara
      Pan_g23479 Panagrellus redivivus From_analysis: WormBase-Compara
      chrV_pilon.g16794 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00291007 Trichuris muris From_analysis: WormBase-Compara
      WBGene00302102 Trichuris muris From_analysis: WormBase-Compara
    Paralog (35)
    Structured_description: Concise_description: C29F3.7 encodes a CUB-like domain-containing protein; C29F3.7 is involved in the transcriptional, innate immune response towards several different bacterial pathogens. Paper_evidence: WBPaper00041211
          Curator_confirmed: WBPerson1843
          Date_last_updated: 19 Feb 2014 00:00:00
      Automated_description: Involved in innate immune response. Located in membrane raft. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C29F3.7a
      C29F3.7b
    Corresponding_CDS_history: C29F3.7:wp51
      C29F3.7:wp87
    Corresponding_transcript: C29F3.7a.1
      C29F3.7b.1
    Associated_feature: WBsf647590
      WBsf233020
      WBsf233021
  Experimental_info: RNAi_result: WBRNAi00070099 Inferred_automatically: RNAi_primary
      WBRNAi00008462 Inferred_automatically: RNAi_primary
      WBRNAi00041466 Inferred_automatically: RNAi_primary
      WBRNAi00029320 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1011687
      Expr1033387
      Expr1145495
      Expr2001222
      Expr2019443
    Drives_construct: WBCnstr00033468
    Construct_product: WBCnstr00033468
    Microarray_results (17)
    Expression_cluster (288)
    Interaction (49)
  Map_info: Positive: Positive_clone: C29F3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 7.9
  Reference: WBPaper00028789
    WBPaper00037777
    WBPaper00041211
    WBPaper00044217
    WBPaper00047109
    WBPaper00061547
    WBPaper00065331
  Method: Gene