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WormBase Tree Display for Gene: WBGene00007807

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Name Class

WBGene00007807SMapS_parentSequenceC29F3
IdentityVersion1
NameSequence_nameC29F3.7
Molecular_nameC29F3.7a
C29F3.7a.1
CE31888
C29F3.7b
CE40917
C29F3.7b.1
Other_nameCELE_C29F3.7Accession_evidenceNDBBX284605
Public_nameC29F3.7
DB_infoDatabaseAceViewgene5P837
WormQTLgeneWBGene00007807
WormFluxgeneWBGene00007807
NDBlocus_tagCELE_C29F3.7
PanthergeneCAEEL|WormBase=WBGene00007807|UniProtKB=O17616
familyPTHR47407
NCBIgene180036
RefSeqproteinNM_171555.7
NM_001129398.4
TREEFAMTREEFAM_IDTF316078
TrEMBLUniProtAccA5JYV2
O17616
UniProt_GCRPUniProtAccO17616
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (65)
RNASeq_FPKM (74)
GO_annotation00030131
00030132
OrthologWBGene00072853Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00036012Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
WBGene00036013Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00042510Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00036011Caenorhabditis briggsaeFrom_analysisOMA
WormBase-Compara
WBGene00161562Caenorhabditis brenneriFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00079383Caenorhabditis remaneiFrom_analysisOMA
Inparanoid_8
WBGene00081996Caenorhabditis remaneiFrom_analysisOMA
WormBase-Compara
WBGene00142581Caenorhabditis brenneriFrom_analysisOMA
WormBase-Compara
WBGene00142745Caenorhabditis brenneriFrom_analysisOMA
TreeFam
WormBase-Compara
WBGene00149780Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00079385Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00161105Caenorhabditis brenneriFrom_analysisInparanoid_8
WormBase-Compara
WBGene00148221Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00041129Caenorhabditis briggsaeFrom_analysisInparanoid_8
WBGene00063726Caenorhabditis remaneiFrom_analysisInparanoid_8
WBGene00147499Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00148147Caenorhabditis brenneriFrom_analysisWormBase-Compara
WBGene00164838Caenorhabditis brenneriFrom_analysisWormBase-Compara
CBOVI.g11444Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP26.g15852Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g2236Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP26.g2237Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP31.g3674Caenorhabditis uteleiaFrom_analysisWormBase-Compara
Cang_2012_03_13_00161.g5960Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_V.g21325Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g21327Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g21328Caenorhabditis nigoniFrom_analysisWormBase-Compara
Cnig_chr_V.g21330Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16265Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp11.Scaffold629.g16266Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00772.g15334Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_00772.g15335Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_03491.g30367Caenorhabditis sinicaFrom_analysisWormBase-Compara
Csp5_scaffold_06166.g36164Caenorhabditis sinicaFrom_analysisWormBase-Compara
GCK72_015656Caenorhabditis remaneiFrom_analysisWormBase-Compara
GCK72_020865Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g12996Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g23479Panagrellus redivivusFrom_analysisWormBase-Compara
chrV_pilon.g16794Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00291007Trichuris murisFrom_analysisWormBase-Compara
WBGene00302102Trichuris murisFrom_analysisWormBase-Compara
Paralog (35)
Structured_descriptionConcise_descriptionC29F3.7 encodes a CUB-like domain-containing protein; C29F3.7 is involved in the transcriptional, innate immune response towards several different bacterial pathogens.Paper_evidenceWBPaper00041211
Curator_confirmedWBPerson1843
Date_last_updated19 Feb 2014 00:00:00
Automated_descriptionInvolved in innate immune response. Located in membrane raft.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC29F3.7a
C29F3.7b
Corresponding_CDS_historyC29F3.7:wp51
C29F3.7:wp87
Corresponding_transcriptC29F3.7a.1
C29F3.7b.1
Associated_featureWBsf647590
WBsf233020
WBsf233021
Experimental_infoRNAi_resultWBRNAi00070099Inferred_automaticallyRNAi_primary
WBRNAi00008462Inferred_automaticallyRNAi_primary
WBRNAi00041466Inferred_automaticallyRNAi_primary
WBRNAi00029320Inferred_automaticallyRNAi_primary
Expr_patternExpr1011687
Expr1033387
Expr1145495
Expr2001222
Expr2019443
Drives_constructWBCnstr00033468
Construct_productWBCnstr00033468
Microarray_results (17)
Expression_cluster (288)
InteractionWBInteraction000144755
WBInteraction000170492
WBInteraction000172227
WBInteraction000175620
WBInteraction000180422
WBInteraction000181610
WBInteraction000187521
WBInteraction000188319
WBInteraction000189269
WBInteraction000194490
WBInteraction000194925
WBInteraction000195124
WBInteraction000223274
WBInteraction000243045
WBInteraction000262985
WBInteraction000272322
WBInteraction000274908
WBInteraction000282476
WBInteraction000289866
WBInteraction000299735
WBInteraction000306059
WBInteraction000312669
WBInteraction000315782
WBInteraction000318532
WBInteraction000332264
WBInteraction000333327
WBInteraction000334985
WBInteraction000338404
WBInteraction000345064
WBInteraction000350851
WBInteraction000352399
WBInteraction000356331
WBInteraction000359604
WBInteraction000362016
WBInteraction000368234
WBInteraction000393178
WBInteraction000399809
WBInteraction000410222
WBInteraction000426905
WBInteraction000429278
WBInteraction000430611
WBInteraction000432133
WBInteraction000450288
WBInteraction000458962
WBInteraction000461881
WBInteraction000503094
WBInteraction000518638
WBInteraction000524358
WBInteraction000571037
Map_infoPositivePositive_cloneC29F3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV7.9
ReferenceWBPaper00028789
WBPaper00037777
WBPaper00041211
WBPaper00044217
WBPaper00047109
WBPaper00061547
WBPaper00065331
MethodGene