WormBase Tree Display for Gene: WBGene00007806

WBGene00007806 SMap: S_parent: Sequence: C29F3
  Identity: Version: 2
    Name: CGC_name: clec-230 Person_evidence: WBPerson2531
      Sequence_name: C29F3.5
      Molecular_name: C29F3.5
        C29F3.5.1
        CE08439
      Other_name: CELE_C29F3.5 Accession_evidence: NDB BX284605
      Public_name: clec-230
    DB_info: Database: AceView gene 5P828
        WormQTL gene WBGene00007806
        WormFlux gene WBGene00007806
        NDB locus_tag CELE_C29F3.5
        Panther gene CAEEL|WormBase=WBGene00007806|UniProtKB=O45272
          family PTHR47753
        NCBI gene 183006
        RefSeq protein NM_074406.7
        TREEFAM TREEFAM_ID TF322919
        TrEMBL UniProtAcc O45272
        UniProt_GCRP UniProtAcc O45272
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 09 Oct 2007 15:40:27 WBPerson2970 Name_change: CGC_name: clec-230
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (39)
    Strain: WBStrain00032986
      WBStrain00033002
      WBStrain00033028
    RNASeq_FPKM (74)
    Ortholog: WBGene00081421 Caenorhabditis remanei From_analysis: TreeFam
      CSP38.g19404 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      chrV_pilon.g16791 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog: WBGene00007805 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00021949 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00044264 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00010355 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00044086 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
    Structured_description: Automated_description: Enriched in germline precursor cell; hypodermis; pharyngeal muscle cell; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty-five chemicals including tryptophan; D-glucose; and Zidovudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C29F3.5
    Corresponding_transcript: C29F3.5.1
    Associated_feature: WBsf653446
      WBsf235054
  Experimental_info: RNAi_result: WBRNAi00011334 Inferred_automatically: RNAi_primary
      WBRNAi00029318 Inferred_automatically: RNAi_primary
      WBRNAi00041464 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014187
      Expr1145493
      Expr2010137
      Expr2028378
    Drives_construct: WBCnstr00033469
    Construct_product: WBCnstr00033469
    Microarray_results (19)
    Expression_cluster (199)
    Interaction (105)
  Map_info: Map: V Position: 7.87325 Error: 0.005217
    Positive: Positive_clone: C29F3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031002
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene