Questions, Feedback & Help
Send us an email and we'll get back to you ASAP. Or you can read our Frequently Asked Questions.

WormBase Tree Display for Gene: WBGene00007802

expand all nodes | collapse all nodes | view schema

Name Class

WBGene00007802SMapS_parentSequenceC29E6
IdentityVersion2
NameCGC_namecutl-27Person_evidenceWBPerson52
Sequence_nameC29E6.4
Molecular_nameC29E6.4
C29E6.4.1
CE44441
Other_nameCELE_C29E6.4Accession_evidenceNDBBX284604
Public_namecutl-27
DB_infoDatabaseAceViewgene4M645
WormQTLgeneWBGene00007802
WormFluxgeneWBGene00007802
NDBlocus_tagCELE_C29E6.4
PanthergeneCAEEL|WormBase=WBGene00007802|UniProtKB=Q18298
familyPTHR47327
NCBIgene183003
RefSeqproteinNM_069851.4
TREEFAMTREEFAM_IDTF318269
TrEMBLUniProtAccQ18298
UniProt_GCRPUniProtAccQ18298
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
207 May 2008 10:04:34WBPerson2970Name_changeCGC_namecutl-27
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcutl
Allele (89)
RNASeq_FPKM (74)
GO_annotation00060861
Ortholog (31)
Paralog (14)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC29E6.4
Corresponding_CDS_historyC29E6.4:wp167
C29E6.4:wp201
C29E6.4:wp211
Corresponding_transcriptC29E6.4.1
Other_sequenceACC09238_1
EX551148.1
EX537496.1
Associated_featureWBsf660768
WBsf997987
WBsf1018295
Experimental_infoRNAi_resultWBRNAi00081684Inferred_automaticallyRNAi_primary
WBRNAi00041458Inferred_automaticallyRNAi_primary
WBRNAi00011327Inferred_automaticallyRNAi_primary
Expr_patternExpr1018102
Expr1145487
Expr2010624
Expr2028864
Microarray_results (18)
Expression_clusterWBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00044316:CH3HgCl_7.5uM_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044857:BAR-1_upregulated
WBPaper00045390:tunicamycin_downregulated
WBPaper00045774:clk-1_upregulated
WBPaper00048988:daf-16(mu86)_downregulated_neuron
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050344:PLM-neuron_enriched
WBPaper00050801:DAF-12_dauer_regulome
WBPaper00050801:DAF-16_dauer_regulome
WBPaper00050801:DPY-21_dauer_regulome
WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00053302:alovudine_72h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053308:SMG-2_associated_NMD(-)_unaltered_ClassII
WBPaper00053771:down_by_skn-1(RNAi)_at_dpy-7(e88)
WBPaper00053771:up_at_dpy-7(e88)
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00054493:hpl-2(tm1489)_upregulated
WBPaper00054758:alg-1(gk204)_upregulated
WBPaper00055013:hmg-3(bar24)_downregulated
WBPaper00055013:hmg-4(RNAi)_downregulated
WBPaper00055103:thoc-5(wy822)_upregulated
WBPaper00055226:adr-1(tm668)_upregulated
WBPaper00055354:eat-2(ad1116)_upregulated
WBPaper00055354:Metformin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00055941:atfs-1(et15)_upregulated
WBPaper00056161:male_enriched_siRNA
WBPaper00056169:rrf-3(pk1426)_downregulated_L3
WBPaper00056290:hsp-6(mg585)_upregulated
WBPaper00056330:glycine_downregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057041:unc-70(cas983)_upregulated
WBPaper00057143:ztf-11(RNAi)_downregulated
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:sin-3(tm1276)_downregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059328:mrps-5(RNAi)_upregulated_mRNA
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059728:5ug_cholesterol_upregulated
WBPaper00059728:20ug_cholesterol_upregulated
WBPaper00060661:sensory-neuron_enriched
WBPaper00060764:swsn-1(os22ts)_upregulated
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061203:sin-3(tm1276)_upregulated
WBPaper00061340:ant_arc_V
WBPaper00061340:hyp1V_and_ant_arc_V
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061527:srj-42-srw-113
WBPaper00061753:csr-1(tor159)_downregulated_20C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062534:fat-P-80_downregulated_ech-6(RNAi)
WBPaper00062585:hlh-26(ok1453)_upregulated_E.faecium
WBPaper00064539:nhr-114(gk849)_downregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00065005:sams-3(RNAi)_upregulated
WBPaper00065096:25C_vs_20C_downregulated
WBPaper00065096:Day10_vs_Day1_downregulated
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065746:eat-2(ad1113)_downregulated
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:tetraploid_vs_diploid_upregulated
cgc4489_group_2
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045673:colistin_upregulated
WBPaper00047070:N2_UV_downregulated
WBPaper00050407:hsp-6(RNAi)_upregulated
WBPaper00056330:mrps-5(RNAi)_upregulated
[cgc5376]:let-60(G12V)-regulated_genes
Interaction (20)
Map_infoMapIVPosition5.36252Error0.0015
PositivePositive_cloneC29E6Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene