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WormBase Tree Display for Gene: WBGene00007733

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Name Class

WBGene00007733SMapS_parentSequenceC25G4
IdentityVersion2
NameCGC_namesmz-1Paper_evidenceWBPaper00028451
Person_evidenceWBPerson109
Sequence_nameC25G4.6
Molecular_nameC25G4.6
C25G4.6.1
CE05307
Other_nameCELE_C25G4.6Accession_evidenceNDBBX284604
Public_namesmz-1
DB_infoDatabaseAceViewgene4N221
WormQTLgeneWBGene00007733
WormFluxgeneWBGene00007733
NDBlocus_tagCELE_C25G4.6
PanthergeneCAEEL|WormBase=WBGene00007733|UniProtKB=Q18167
familyPTHR31327
NCBIgene178197
RefSeqproteinNM_069979.8
TREEFAMTREEFAM_IDTF319103
TrEMBLUniProtAccQ18167
UniProt_GCRPUniProtAccQ18167
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
208 Aug 2013 16:41:57WBPerson2970Name_changeCGC_namesmz-1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classsmz
Allele (18)
StrainWBStrain00033243
RNASeq_FPKM (74)
GO_annotation00060361
00060362
00060363
Ortholog (35)
Paralog (14)
Structured_descriptionConcise_descriptionsmz-1 encodes a PDZ domain-containing protein; SMZ-1 activity is required for spermatocytes to progress through meiotic divisions, and specifically for meiotic chromosome segregation; SMZ-1 localizes to spermatogenic meiotic chromosomes and mature sperm chromatin.Paper_evidenceWBPaper00028451
Curator_confirmedWBPerson1843
WBPerson324
Date_last_updated11 Nov 2014 00:00:00
Automated_descriptionInvolved in male meiosis chromosome segregation. Part of chromatin. Expressed in male gonad and sperm.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC25G4.6
Corresponding_transcriptC25G4.6.1
Other_sequence (29)
Associated_featureWBsf229296
Experimental_infoRNAi_resultWBRNAi00011182Inferred_automaticallyRNAi_primary
WBRNAi00041215Inferred_automaticallyRNAi_primary
WBRNAi00022623Inferred_automaticallyRNAi_primary
WBRNAi00029205Inferred_automaticallyRNAi_primary
Expr_patternExpr4210
Expr9250
Expr1021333
Expr1033348
Expr1145251
Expr2015932
Expr2034165
Drives_constructWBCnstr00033525
Construct_productWBCnstr00033525
AntibodyWBAntibody00001147
WBAntibody00001148
Microarray_results (21)
Expression_cluster (238)
InteractionWBInteraction000103137
WBInteraction000103156
WBInteraction000103524
WBInteraction000103991
WBInteraction000104265
WBInteraction000104499
WBInteraction000105036
WBInteraction000105427
WBInteraction000105638
WBInteraction000106973
WBInteraction000109031
WBInteraction000109799
WBInteraction000111174
WBInteraction000112423
WBInteraction000112944
WBInteraction000113206
WBInteraction000114860
WBInteraction000114953
WBInteraction000115730
WBInteraction000115988
WBInteraction000117517
WBInteraction000118433
WBInteraction000118940
WBInteraction000118996
WBInteraction000119023
WBInteraction000120187
WBInteraction000120403
WBInteraction000120583
WBInteraction000121565
WBInteraction000122070
WBInteraction000122183
WBInteraction000124040
WBInteraction000124097
WBInteraction000124375
WBInteraction000125133
WBInteraction000133155
WBInteraction000133568
WBInteraction000133929
WBInteraction000135121
WBInteraction000135711
WBInteraction000135849
WBInteraction000135976
WBInteraction000136048
WBInteraction000136384
WBInteraction000138228
WBInteraction000138512
WBInteraction000139173
WBInteraction000140567
WBInteraction000140954
WBInteraction000141993
WBInteraction000142515
WBInteraction000142777
WBInteraction000142837
WBInteraction000142860
WBInteraction000142868
WBInteraction000144583
WBInteraction000144691
WBInteraction000145382
WBInteraction000145414
WBInteraction000146284
WBInteraction000147866
WBInteraction000148211
WBInteraction000148404
WBInteraction000149216
WBInteraction000149493
WBInteraction000150074
WBInteraction000150497
WBInteraction000150652
WBInteraction000151033
WBInteraction000151431
WBInteraction000151436
WBInteraction000151490
WBInteraction000151540
WBInteraction000152134
WBInteraction000152259
WBInteraction000152319
WBInteraction000152679
WBInteraction000152704
WBInteraction000156971
WBInteraction000159972
WBInteraction000160100
WBInteraction000160254
WBInteraction000161249
WBInteraction000161485
WBInteraction000162735
WBInteraction000163561
WBInteraction000163832
WBInteraction000166557
WBInteraction000166589
WBInteraction000168326
WBInteraction000170212
WBInteraction000172141
WBInteraction000174570
WBInteraction000175023
WBInteraction000175281
WBInteraction000176122
WBInteraction000176465
WBInteraction000176548
WBInteraction000177337
WBInteraction000178193
WBInteraction000178934
WBInteraction000179160
WBInteraction000179876
WBInteraction000181977
WBInteraction000182498
WBInteraction000182649
WBInteraction000182860
WBInteraction000185282
WBInteraction000187384
WBInteraction000188356
WBInteraction000188860
WBInteraction000189020
WBInteraction000189121
WBInteraction000189390
WBInteraction000190289
WBInteraction000190596
WBInteraction000190944
WBInteraction000191942
WBInteraction000192166
WBInteraction000193717
WBInteraction000193802
WBInteraction000194544
WBInteraction000196758
WBInteraction000197062
WBInteraction000197429
WBInteraction000197621
WBInteraction000197987
WBInteraction000201052
WBInteraction000202287
WBInteraction000202440
WBInteraction000204288
WBInteraction000204657
WBInteraction000205313
WBInteraction000205880
WBInteraction000207234
WBInteraction000207387
WBInteraction000207523
WBInteraction000208051
WBInteraction000210055
WBInteraction000210343
WBInteraction000213127
WBInteraction000213818
WBInteraction000214345
WBInteraction000215461
WBInteraction000216534
WBInteraction000217179
WBInteraction000219064
WBInteraction000219423
WBInteraction000219982
WBInteraction000221163
WBInteraction000221583
WBInteraction000221654
WBInteraction000222092
WBInteraction000222704
WBInteraction000223753
WBInteraction000227623
WBInteraction000228272
WBInteraction000229349
WBInteraction000229838
WBInteraction000230506
WBInteraction000233416
WBInteraction000234397
WBInteraction000234461
WBInteraction000235251
WBInteraction000237967
WBInteraction000238535
WBInteraction000241150
WBInteraction000242141
WBInteraction000243172
WBInteraction000244600
WBInteraction000245719
WBInteraction000249004
WBInteraction000253731
WBInteraction000255930
WBInteraction000256122
WBInteraction000257500
WBInteraction000258016
WBInteraction000258419
WBInteraction000263195
WBInteraction000264459
WBInteraction000264783
WBInteraction000267131
WBInteraction000267376
WBInteraction000267625
WBInteraction000269331
WBInteraction000271983
WBInteraction000273778
WBInteraction000277426
WBInteraction000277439
WBInteraction000277955
WBInteraction000279655
WBInteraction000281177
WBInteraction000281737
WBInteraction000282137
WBInteraction000285619
WBInteraction000286604
WBInteraction000292373
WBInteraction000293043
WBInteraction000293952
WBInteraction000294434
WBInteraction000296148
WBInteraction000297916
WBInteraction000300963
WBInteraction000302071
WBInteraction000302112
WBInteraction000302952
WBInteraction000305571
WBInteraction000310180
WBInteraction000312097
WBInteraction000312942
WBInteraction000313038
WBInteraction000314728
WBInteraction000315747
WBInteraction000315942
WBInteraction000317616
WBInteraction000319281
WBInteraction000322067
WBInteraction000324679
WBInteraction000324901
WBInteraction000325696
WBInteraction000326516
WBInteraction000329096
WBInteraction000331224
WBInteraction000337363
WBInteraction000337826
WBInteraction000340234
WBInteraction000341908
WBInteraction000346579
WBInteraction000347794
WBInteraction000351888
WBInteraction000352823
WBInteraction000353305
WBInteraction000353694
WBInteraction000354968
WBInteraction000355097
WBInteraction000360769
WBInteraction000362527
WBInteraction000362872
WBInteraction000366330
WBInteraction000372128
WBInteraction000388850
WBInteraction000389390
WBInteraction000390294
WBInteraction000393747
WBInteraction000394624
WBInteraction000398980
WBInteraction000400267
WBInteraction000402686
WBInteraction000402907
WBInteraction000403861
WBInteraction000403929
WBInteraction000404566
WBInteraction000404843
WBInteraction000409784
WBInteraction000410472
WBInteraction000417227
WBInteraction000421739
WBInteraction000425796
WBInteraction000431570
WBInteraction000437609
WBInteraction000438648
WBInteraction000440931
WBInteraction000442801
WBInteraction000444215
WBInteraction000446969
WBInteraction000451472
WBInteraction000451713
WBInteraction000503089
WBInteraction000544095
WBInteraction000544096
WBInteraction000544235
WBInteraction000544361
WBInteraction000544362
WBInteraction000544555
Map_infoMapIVPosition5.96655
PositivePositive_cloneC25G4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00028451
WBPaper00032233
WBPaper00035199
WBPaper00052036
WBPaper00057218
WBPaper00057785
WBPaper00064502
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene