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WormBase Tree Display for Gene: WBGene00007647

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Name Class

WBGene00007647SMapS_parentSequenceC17E4
IdentityVersion1
NameSequence_nameC17E4.10
Molecular_nameC17E4.10a
C17E4.10a.1
CE32589
C17E4.10b
CE42778
C17E4.10b.1
Other_nameCELE_C17E4.10Accession_evidenceNDBBX284601
Public_nameC17E4.10
DB_infoDatabase (8)
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (59)
RNASeq_FPKM (74)
GO_annotation00085567
Contained_in_operonCEOP1544
Ortholog (19)
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalpapaap; germ line; interfacial epithelial cell; neurons; and ventral nerve cord based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including dpy-10; daf-12; and gld-1 based on tiling array; RNA-seq; and microarray studies. Is affected by thirteen chemicals including D-glucose; levamisole; and Zidovudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC17E4.10a
C17E4.10b
Corresponding_CDS_historyC17E4.10:wp91
Corresponding_transcriptC17E4.10a.1
C17E4.10b.1
Other_sequenceEY462533.1
Tcol_isotig13756
Oden_isotig18572
ACC08190_1
EY472074.1
Acan_isotig03052
Acan_isotig03053
Associated_feature (14)
Experimental_infoRNAi_resultWBRNAi00002968Inferred_automaticallyRNAi_primary
WBRNAi00040796Inferred_automaticallyRNAi_primary
Expr_patternExpr1011879
Expr1033305
Expr1144835
Expr2000902
Expr2019123
Microarray_results (25)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:A-class-motor-neurons_larva_enriched
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:dopaminergic-neurons_larva_enriched
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_larva_enriched
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:hypodermis_larva_enriched
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00040221:DAF-12_target_ALF4
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044760:germline_specific
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_downregulated
WBPaper00048988:neuron_expressed
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
WBPaper00049920:Glucose-Diet_downregulated_N2
WBPaper00050344:AFD-neuron_enriched
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:body-muscle_expressed
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051257:Levamisole_upregulated
WBPaper00051558:aging_regulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053599:female_vs_male_upregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055648:germline_expressed
WBPaper00056034:pals-22(jy3)_downregulated
WBPaper00057288:iff-1(RNAi)_upregulated_transcript
WBPaper00058969:RIS_enriched
WBPaper00059027:neuron-synapses_depleted
WBPaper00059471:EGL-43_interacting
WBPaper00059763:neuron_expressed
WBPaper00060661:sensory-neuron_enriched
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061007:S.aquatilis_downregulated
WBPaper00061340:Arcade_cell_anterior_and_posterior
WBPaper00061340:DA
WBPaper00061340:DA_DB
WBPaper00061340:DB
WBPaper00061340:K_Kprime
WBPaper00061340:Neuroblast_HSN_PHB
WBPaper00061340:Parent_of_hyp1V_and_ant_arc_V
WBPaper00061340:URA_parent
WBPaper00061439:unc-30(ok613)_downregulated
WBPaper00061439:unc-30(ok613)_downregulated_P.aeruginosa-infection
WBPaper00061527:pap-1_3331-ash-2_3714
WBPaper00061651:PVM_enriched
WBPaper00061651:RME_DV_enriched
WBPaper00061651:URA_enriched
WBPaper00061651:URB_enriched
WBPaper00062325:etr-1(lq61)_downregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064505:tamoxifen_upregulated
WBPaper00064716:paraquat_upregulated
WBPaper00064939:vit-5(RNAi)_upregulated
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065841:118_0
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066062:xrep-4(lax137)_upregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4386_cluster_5_2
WBPaper00025032:cluster_15
WBPaper00025032:cluster_21
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00030839:Embryo_Pan_Neuronal
WBPaper00030839:Larval_A_Class
WBPaper00030839:Larval_Pan_Neuronal
WBPaper00030985:Enterococcus_faecalis_downregulated
WBPaper00031003:0hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031532:Larva_Pan_Neuronal_Enriched
WBPaper00032948:StarveUp1
WBPaper00035084:L1_enriched_AIN-2_IP
WBPaper00035084:L2_enriched_AIN-2_IP
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00035227:heat_shock_regulated
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_F
WBPaper00037695:LD_3-day
WBPaper00037901:GLD-1_mRNA_targets
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040963:TA300_down
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00045263:isp-1(qm150)_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00053827:pyoverdine_upregulated
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
Interaction (12)
Map_infoPositivePositive_cloneC17E4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionI3.76379
ReferenceWBPaper00041771
MethodGene