WormBase Tree Display for Gene: WBGene00007646
expand all nodes | collapse all nodes | view schema
| WBGene00007646 | SMap | S_parent | Sequence | C17E4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nkb-1 | Person_evidence | WBPerson919 | |||||
| WBPerson287 | |||||||||
| Sequence_name | C17E4.9 | ||||||||
| Molecular_name | C17E4.9a | ||||||||
| C17E4.9a.1 | |||||||||
| CE08258 | |||||||||
| C17E4.9b | |||||||||
| Other_name | CELE_C17E4.9 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | nkb-1 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Oct 2008 09:57:22 | WBPerson2970 | Name_change | CGC_name | nkb-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nkb | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00031814 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (17) | |||||||||
| Contained_in_operon | CEOP1544 | ||||||||
| Ortholog (59) | |||||||||
| Paralog | WBGene00010117 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008074 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ATPase activator activity. Predicted to be involved in intracellular monoatomic cation homeostasis and monoatomic cation transmembrane transport. Predicted to be located in plasma membrane. Predicted to be part of sodium:potassium-exchanging ATPase complex. Expressed in neurons and non-striated muscle. Human ortholog(s) of this gene implicated in several diseases, including atrophic gastritis; autoimmune gastritis; and essential hypertension. Is an ortholog of several human genes including ATP1B1 (ATPase Na+/K+ transporting subunit beta 1); ATP1B2 (ATPase Na+/K+ transporting subunit beta 2); and ATP1B3 (ATPase Na+/K+ transporting subunit beta 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:8929 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:820) | ||||
| DOID:10825 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:804) | ||||||
| DOID:0040090 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:820) | ||||||
| DOID:10534 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:820) | ||||||
| Molecular_info | Corresponding_CDS | C17E4.9a | |||||||
| Corresponding_transcript | C17E4.9b | ||||||||
| C17E4.9a.1 | |||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf643584 | ||||||||
| WBsf656741 | |||||||||
| WBsf656742 | |||||||||
| WBsf656743 | |||||||||
| WBsf1010369 | |||||||||
| WBsf218276 | |||||||||
| WBsf218277 | |||||||||
| WBsf218278 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00085451 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00024582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029006 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071041 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024583 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071686 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106126 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00116734 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00040802 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002975 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8227 | ||||||||
| Expr8229 | |||||||||
| Expr11316 | |||||||||
| Expr1017842 | |||||||||
| Expr1033304 | |||||||||
| Expr1144844 | |||||||||
| Expr2014268 | |||||||||
| Expr2032508 | |||||||||
| Drives_construct | WBCnstr00018766 | ||||||||
| Construct_product | WBCnstr00013193 | ||||||||
| WBCnstr00013195 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Map | I | Position | 3.76304 | Error | 0.00056 | |||
| Positive | Positive_clone | C17E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005423 | ||||||||
| WBPaper00010788 | |||||||||
| WBPaper00018962 | |||||||||
| WBPaper00031996 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00043657 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063976 | |||||||||
| WBPaper00064339 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
