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WormBase Tree Display for Gene: WBGene00007482

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Name Class

WBGene00007482SMapS_parentSequenceC09F12
IdentityVersion1
NameSequence_nameC09F12.2
Molecular_nameC09F12.2
C09F12.2.1
CE31409
Other_nameCELE_C09F12.2Accession_evidenceNDBBX284606
Public_nameC09F12.2
DB_infoDatabaseAceViewgeneXL675
WormQTLgeneWBGene00007482
WormFluxgeneWBGene00007482
NDBlocus_tagCELE_C09F12.2
PanthergeneCAEEL|WormBase=WBGene00007482|UniProtKB=Q93199
familyPTHR36851
NCBIgene181294
RefSeqproteinNM_077447.6
TREEFAMTREEFAM_IDTF300900
TrEMBLUniProtAccQ93199
UniProt_GCRPUniProtAccQ93199
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (41)
RNASeq_FPKM (74)
GO_annotation00085510
Ortholog (26)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC09F12.2
Corresponding_CDS_historyC09F12.2:wp83
Corresponding_transcriptC09F12.2.1
Other_sequenceTcol_isotig16030
CRC11832_1
CR10709
Oden_isotig20486
JI241414.1
Associated_featureWBsf663313
WBsf663314
WBsf663315
WBsf236331
Experimental_infoRNAi_resultWBRNAi00028727Inferred_automaticallyRNAi_primary
WBRNAi00010523Inferred_automaticallyRNAi_primary
WBRNAi00040205Inferred_automaticallyRNAi_primary
Expr_patternExpr1016604
Expr1144275
Expr2000653
Expr2018877
Drives_constructWBCnstr00033705
Construct_productWBCnstr00033705
Microarray_results (19)
Expression_clusterWBPaper00033070:Elbe_upregulated
WBPaper00033070:Rhine_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:AVE-neuron_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:coelomocytes_L1-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
WBPaper00040560:hpl-2_L3_upregulated
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042561:smg-2(RNAi)_upregulated
WBPaper00042561:smgl-1(RNAi)_upregulated
WBPaper00042561:smgl-2(RNAi)_upregulated
WBPaper00044260:1-methylnicotinamide_upregulated
WBPaper00044316:CH3HgCl_2.0uM_downregulated
WBPaper00044316:CH3HgCl_7.5uM_downregulated
WBPaper00044426:rotenone_24h_upregulated
WBPaper00044578:reduced-humidity_downregulated_microarray
WBPaper00044736:oscillating_dev_expression
WBPaper00045390:ubc-9(RNAi)_upregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00046012:tdp-1(ok803)_upregulated
WBPaper00046497:B.thuringiensis_0.5mix_downregulated_6h
WBPaper00046741:Garlic-Extract_upregulated_mRNA
WBPaper00048971:daf-16(mgDf50)_upregulated_L1
WBPaper00049498:npr-1(ur89)_regulated_8
WBPaper00049545:jmjd-3.1(+)_upregulated
WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
WBPaper00049954:BPA_downregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_adult_25C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050726:OsmoticStress_regulated_Food
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053388:dauer_regulated_Cluster1
WBPaper00053402:cco-1(RNAi)_upregulated
WBPaper00053810:isp-1(qm150)_downregulated
WBPaper00054872:egl-9(sa307)_downregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00056284:ints-11(RNAi)_downregulated
WBPaper00056443:DietaryRestriction_upregulated
WBPaper00056443:sek-1(km4)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
WBPaper00056617:adr-1_upregulated_L4_transcript
WBPaper00057041:spc-1(cas971)_upregulated
WBPaper00057068:numr-1(RNAi)_downregulated_Cadmium
WBPaper00058598:mex-1(or286)_upregulated
WBPaper00058598:mex-3(eu149)_upregulated
WBPaper00058598:spn-4(tm291)_upregulated
WBPaper00058678:DAF-12_upregulated_PVD
WBPaper00059117:B.subtilis_upregulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060445:nfki-1(cer1)_downregulated_L4
WBPaper00060445:nfki-1(cer1)_upregulated_L1
WBPaper00060661:sensory-neuron_depleted
WBPaper00060764:swsn-1(os22ts)_upregulated
WBPaper00060764:swsn-9(ok1354)_upregulated
WBPaper00060909:atfs-1(cmh15)_downregulated
WBPaper00060909:atfs-1(et18)_downregulated
WBPaper00061340:ADEsh
WBPaper00061340:CEPsh
WBPaper00061340:CEPso
WBPaper00061340:Glia
WBPaper00061340:ILsh_OLLsh_OLQsh
WBPaper00061340:ILso
WBPaper00061340:Tail_hypodermis
WBPaper00061340:XXX
WBPaper00061390:N2_ascarosides_downregulated
WBPaper00061424:Diet_MYb120_upregulated
WBPaper00061424:Diet_MYb131_upregulated
WBPaper00061439:unc-30(ok613)_upregulated
WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
WBPaper00061527:col-128-cdh-10_9234
WBPaper00061653:alh-4(hj221)_downregulated
WBPaper00061699:daf-18(ok480)_upregulated
WBPaper00061753:csr-1(tor159)_upregulated_20C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_downregulated_N2
WBPaper00062345:bortezomib_4h_downregulated_zip-1(jy13)
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064156:lbp-3(overexpress)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064502:nhr-23(kry61);spe-44(fx110)_upregulated
WBPaper00064632:daf-2(e1370)_downregulated_intestine
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00064721:fasn-1(g14)_downregulated_starved
WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
WBPaper00065074:glna(-)_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
WBPaper00065096:npr-8(ok1439)_upregulated_Day1_20C
WBPaper00065581:hpk-1(pk1393)_upregulated
WBPaper00065749:Heat-Shock_downregulated_endu-2(tm4977)
WBPaper00065749:Heat-Shock_downregulated_N2
WBPaper00065841:9_1
WBPaper00065841:15_0
WBPaper00065841:26_1
WBPaper00066005:RAGA-1_degradation_somatic_upregulated
WBPaper00066110:Cisplatin_upregulated_diploid
WBPaper00066110:Doxorubicin_upregulated_diploid
WBPaper00066110:tetraploid_vs_diploid_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4489_group_19
WBPaper00026929:Resveratrol_regulated_daf-16
WBPaper00031252:AIN-1_IP_enriched
WBPaper00031252:AIN-2_IP_enriched
WBPaper00034739:N2lessDR1350
WBPaper00035084:L3_enriched_AIN-2_IP
WBPaper00036130:mir-243_up_regulated
WBPaper00036286:Pattern_G
WBPaper00038172:crh-1null_up_regulated
WBPaper00040858:eQTL_regulated_developing
WBPaper00040985:AIN-2_asynchronous_intestine
WBPaper00042331:a-SWCNTs_downregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
[cgc5376]:let-60(G12V)-regulated_genes
[cgc6390]:Cluster_A
InteractionWBInteraction000439279
WBInteraction000444388
Map_infoPositivePositive_cloneC09F12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionX2.85757
MethodGene