WormBase Tree Display for Gene: WBGene00007481

WBGene00007481 SMap: S_parent: Sequence: C09F9
  Identity: Version: 2
    Name: Sequence_name: C09F9.4
      Molecular_name: C09F9.4
      Other_name: CELE_C09F9.4 Accession_evidence: NDB BX284602
      Public_name: C09F9.4
    DB_info: Database: AceView gene 2P3
        WormQTL gene WBGene00007481
        NDB locus_tag CELE_C09F9.4
        NCBI gene 182457
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 12 May 2006 09:49:36 WBPerson1983 Event: Changed_class: CDS Pseudogene
    Status: Live
  Gene_info: Biotype: SO:0000336
    Allele (11)
    RNASeq_FPKM (74)
    Paralog: WBGene00007479 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
    Structured_description: Automated_description: Is affected by several genes including daf-16; eat-2; and sek-1 based on microarray and RNA-seq studies. Is affected by seven chemicals including methylmercury hydroxide; Psoralens; and allantoin based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS_history: C09F9.4:wp159
    Corresponding_pseudogene: C09F9.4
    Other_sequence: CR06276
      Tcir_isotig05395
      CRC01807_1
      CJC11062_1
      CR06446
      Dviv_isotig26035
      CRC07322_1
  Experimental_info: Microarray_results: 177549_s_at
    Expression_cluster: WBPaper00035197:fer-1_downregulated
      WBPaper00040209:B.thuringiensis_downregulated_MY15
      WBPaper00043945:MeHg_upregulated
      WBPaper00048971:daf-16(mgDf50)_downregulated_L1
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00053771:up_at_dpy-7(e88)
      WBPaper00055334:DLC-1_interacting
      WBPaper00055354:eat-2(ad1116)_upregulated
      WBPaper00055354:Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Metformin_upregulated
      WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
      WBPaper00055354:Rapamycin-Rifampicin_upregulated
      WBPaper00055354:Rapamycin_downregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055944:C.butyricum_vs_OP50_downregulated
      WBPaper00056139:soil-microbiota_upregulated
      WBPaper00056275:P.aeruginosa_downregulated
      WBPaper00056275:P.aeruginosa_downregulated_atf-7(qd22qd130)_dependent
      WBPaper00056443:DietaryRestriction_upregulated
      WBPaper00056443:sek-1(km4)_upregulated
      WBPaper00056617:adr-1_upregulated_L4_transcript
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00059224:tph-1(mg280)_upregulated
      WBPaper00059567:olrn-1(ums9)_regulated
      WBPaper00059735:glucose_upregulated_lpin-1(RNAi)
      WBPaper00059735:glucose_upregulated_N2
      WBPaper00060084:cco-1(RNAi)_downregulated_N2
      WBPaper00061530:nhr-49(e2144)_downregulated
      WBPaper00061613:human-alpha-Synuclein(A53T)_upregulated
      WBPaper00061613:human-amyloid-beta_alpha-Synuclein(A53T)_upregulated
      WBPaper00062325:muscle_depleted_noncoding-RNA
      WBPaper00064532:pals-25(icb98)_downregulated
      WBPaper00064871:hypoxia_downregulated_F2
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00031832:slr-2_regulated
      WBPaper00034661:AgNPs_downregulated
      WBPaper00034739:N2lessDR1350
      WBPaper00038172:aak-2overexpression_down_regulated
      WBPaper00038172:crh-1null_up_regulated
      WBPaper00039866:ClassComp_daf-19_upregulated
      WBPaper00039866:SAM_daf-19_upregulated
      WBPaper00040185:nhr-23(RNAi)_downregulated
      WBPaper00046548:dafachronic-acid_upregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
  Map_info: Positive: Positive_clone: C09F9 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 23.3957
  Method: Gene