WormBase Tree Display for Gene: WBGene00007436
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| WBGene00007436 | SMap | S_parent | Sequence | C08B11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C08B11.9 | |||||||
| Molecular_name | C08B11.9 | ||||||||
| C08B11.9.1 | |||||||||
| CE01479 | |||||||||
| Other_name | CELE_C08B11.9 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C08B11.9 | ||||||||
| DB_info | Database | AceView | gene | 2I326 | |||||
| WormQTL | gene | WBGene00007436 | |||||||
| WormFlux | gene | WBGene00007436 | |||||||
| NDB | locus_tag | CELE_C08B11.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007436|UniProtKB=Q09227 | |||||||
| family | PTHR14553 | ||||||||
| NCBI | gene | 3564855 | |||||||
| RefSeq | protein | NM_001026763.5 | |||||||
| SwissProt | UniProtAcc | Q09227 | |||||||
| TREEFAM | TREEFAM_ID | TF105992 | |||||||
| UniProt_GCRP | UniProtAcc | Q09227 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP2328 | ||||||||
| Ortholog (28) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaapppa; ABalapaapa; ABalpapaap; GLR; and germ line based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by eight chemicals including rotenone; stavudine; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF2452) and Protein of unknown function DUF2452. Is an ortholog of human C1orf50 (chromosome 1 open reading frame 50). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C08B11.9 | |||||||
| Corresponding_transcript | C08B11.9.1 | ||||||||
| Other_sequence | EX553624.1 | ||||||||
| Acan_isotig11318 | |||||||||
| Hbac_isotig04459 | |||||||||
| ACC20273_1 | |||||||||
| CBC08312_1 | |||||||||
| Dviv_isotig18046 | |||||||||
| JI478301.1 | |||||||||
| Dviv_isotig18045 | |||||||||
| PPC05993_1 | |||||||||
| Associated_feature | WBsf223432 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00062115 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040067 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00010426 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013481 | ||||||||
| Expr1033204 | |||||||||
| Expr1144132 | |||||||||
| Expr2000594 | |||||||||
| Expr2018820 | |||||||||
| Drives_construct | WBCnstr00033736 | ||||||||
| Construct_product | WBCnstr00033736 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (103) | |||||||||
| Interaction (68) | |||||||||
| Map_info | Positive | Positive_clone | C08B11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.653571 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
