WormBase Tree Display for Gene: WBGene00007436
expand all nodes | collapse all nodes | view schema
WBGene00007436 | SMap | S_parent | Sequence | C08B11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C08B11.9 | |||||||
Molecular_name | C08B11.9 | ||||||||
C08B11.9.1 | |||||||||
CE01479 | |||||||||
Other_name | CELE_C08B11.9 | Accession_evidence | NDB | BX284602 | |||||
Public_name | C08B11.9 | ||||||||
DB_info | Database | AceView | gene | 2I326 | |||||
WormQTL | gene | WBGene00007436 | |||||||
WormFlux | gene | WBGene00007436 | |||||||
NDB | locus_tag | CELE_C08B11.9 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00007436|UniProtKB=Q09227 | |||||||
family | PTHR14553 | ||||||||
NCBI | gene | 3564855 | |||||||
RefSeq | protein | NM_001026763.5 | |||||||
SwissProt | UniProtAcc | Q09227 | |||||||
TREEFAM | TREEFAM_ID | TF105992 | |||||||
UniProt_GCRP | UniProtAcc | Q09227 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (13) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP2328 | ||||||||
Ortholog (28) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaapppa; ABalapaapa; ABalpapaap; GLR; and germ line based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray; tiling array; proteomic; and RNA-seq studies. Is affected by eight chemicals including rotenone; stavudine; and Rifampin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF2452) and Protein of unknown function DUF2452. Is an ortholog of human C1orf50 (chromosome 1 open reading frame 50). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C08B11.9 | |||||||
Corresponding_transcript | C08B11.9.1 | ||||||||
Other_sequence | EX553624.1 | ||||||||
Acan_isotig11318 | |||||||||
Hbac_isotig04459 | |||||||||
ACC20273_1 | |||||||||
CBC08312_1 | |||||||||
Dviv_isotig18046 | |||||||||
JI478301.1 | |||||||||
Dviv_isotig18045 | |||||||||
PPC05993_1 | |||||||||
Associated_feature | WBsf223432 | ||||||||
Experimental_info | RNAi_result | WBRNAi00062115 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00040067 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00010426 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (5) | |||||||||
Drives_construct | WBCnstr00033736 | ||||||||
Construct_product | WBCnstr00033736 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (103) | |||||||||
Interaction (68) | |||||||||
Map_info | Positive | Positive_clone | C08B11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 0.653571 | |||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Method | Gene |