WormBase Tree Display for Gene: WBGene00007407

WBGene00007407 SMap: S_parent: Sequence: C07B5
  Identity: Version: 1
    Name: Sequence_name: C07B5.2
      Molecular_name: C07B5.2
        C07B5.2.1
        CE00892
      Other_name: CELE_C07B5.2 Accession_evidence: NDB BX284606
      Public_name: C07B5.2
    DB_info: Database: AceView gene XK134
        WormQTL gene WBGene00007407
        WormFlux gene WBGene00007407
        NDB locus_tag CELE_C07B5.2
        NCBI gene 182359
        RefSeq protein NM_077199.3
        TrEMBL UniProtAcc Q17775
        UniProt_GCRP UniProtAcc Q17775
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (19)
    RNASeq_FPKM (74)
    Ortholog (12)
    Structured_description: Automated_description: Enriched in PLML; PLMR; hypodermis; and intestine based on tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; daf-12; and eat-2 based on tiling array; microarray; and RNA-seq studies. Is affected by eight chemicals including Tunicamycin; multi-walled carbon nanotube; and allantoin based on microarray and RNA-seq studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C07B5.2
    Corresponding_transcript: C07B5.2.1
    Associated_feature: WBsf670877
  Experimental_info: RNAi_result: WBRNAi00039983 Inferred_automatically: RNAi_primary
      WBRNAi00090688 Inferred_automatically: RNAi_primary
      WBRNAi00010372 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr83
      Expr1028099
      Expr1144061
      Expr2000562
      Expr2018788
    Drives_construct: WBCnstr00033763
    Construct_product: WBCnstr00033763
    Microarray_results (16)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:bodywall-muscle_L1-larva_expressed
      WBPaper00037950:coelomocytes_L1-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L1-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:hypodermis_larva_enriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
      WBPaper00038438:S.marcescens_24hr_downregulated_TilingArray
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:oscillating_dev_expression
      WBPaper00045257:bar-1(ga80)_downregulated
      WBPaper00045390:tunicamycin_upregulated
      WBPaper00045390:ubc-9(RNAi)_upregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00045774:clk-1_upregulated
      WBPaper00046024:sleep_downregulated_oscillating
      WBPaper00049377:MWCNT_downregulated
      WBPaper00050370:dpy-21(e428)_L3_upregulated
      WBPaper00050488:20C_vs_25C_regulated_N2_adult
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
      WBPaper00050801:DAF-12_dauer_regulome
      WBPaper00050801:DPY-21_dauer_regulome
      WBPaper00050801:SET-4_dauer_regulome
      WBPaper00053402:cco-1(RNAi)_upregulated
      WBPaper00053888:drh-3(rrr2)_upregulated
      WBPaper00054758:alg-1(gk204)_upregulated
      WBPaper00055013:hmg-4(RNAi)_upregulated
      WBPaper00055013:spt-16(RNAi)_upregulated
      WBPaper00055354:eat-2(ad1116)_downregulated
      WBPaper00055354:Rapamycin-Allantoin_downregulated
      WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
      WBPaper00055354:Rifampicin-Allantoin_downregulated
      WBPaper00055827:daf-2(e1370)_upregulated
      WBPaper00055827:pfd-6(gk493446)_upregulated
      WBPaper00055862:antimycin_damt-1(gk961032)_regulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated
      WBPaper00057068:ints-4(RNAi)_upregulated
      WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
      WBPaper00057068:numr-1(RNAi)_downregulated
      WBPaper00058598:mex-3(eu149)_downregulated
      WBPaper00058725:sftb-1(cer6)_downregulated
      WBPaper00058969:RIS_depleted
      WBPaper00059334:sacy-1(depletion)_regulated
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060909:atfs-1(cmh15)_downregulated
      WBPaper00061340:PLM
      WBPaper00061439:unc-30(ok613)_upregulated
      WBPaper00061439:unc-30(ok613)_upregulated_P.aeruginosa-infection
      WBPaper00061527:172183_at-176110_at
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062347:blmp-1(tm548)_upregulated
      WBPaper00062446:nhr-8(hd117)_upregulated
      WBPaper00064509:static-magnetic-field_downregulated
      WBPaper00065993:glp-1(e2141)_upregulated
      WBPaper00066062:xrep-4(lax137)_upregulated
      cgc4489_group_20
      WBPaper00026980:intestine_enriched
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_G
      WBPaper00038172:crh-1null_up_regulated
      WBPaper00040210:Chlorpyrifos_16C_regulated
      WBPaper00045960:L4-lethargus_downregulated
      WBPaper00056330:mrps-5(RNAi)_upregulated
      [cgc6390]:Cluster_B
    Interaction: WBInteraction000390263
      WBInteraction000393725
      WBInteraction000462553
  Map_info: Positive: Positive_clone: C07B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X 1.36633
  Method: Gene