WormBase Tree Display for Gene: WBGene00007389
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| WBGene00007389 | SMap | S_parent | Sequence | C06H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | glb-3 | Paper_evidence | WBPaper00031066 | |||||
| Person_evidence | WBPerson1540 | ||||||||
| Sequence_name | C06H2.5 | ||||||||
| Molecular_name | C06H2.5a | ||||||||
| C06H2.5a.1 | |||||||||
| CE43048 | |||||||||
| C06H2.5b | |||||||||
| CE43118 | |||||||||
| C06H2.5a.2 | |||||||||
| C06H2.5b.1 | |||||||||
| Other_name | CELE_C06H2.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | glb-3 | ||||||||
| DB_info | Database | AceView | gene | 5L619 | |||||
| WormQTL | gene | WBGene00007389 | |||||||
| WormFlux | gene | WBGene00007389 | |||||||
| NDB | locus_tag | CELE_C06H2.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007389|UniProtKB=B6EU62 | |||||||
| family | PTHR46458 | ||||||||
| NCBI | gene | 182348 | |||||||
| RefSeq | protein | NM_001380757.1 | |||||||
| NM_001380758.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF353116 | |||||||
| TrEMBL | UniProtAcc | B6EU62 | |||||||
| B6EU61 | |||||||||
| UniProt_GCRP | UniProtAcc | B6EU62 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 22 Oct 2007 15:16:41 | WBPerson2970 | Name_change | CGC_name | glb-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glb | ||||||||
| Allele (101) | |||||||||
| Strain | WBStrain00037582 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00006261 | ||||||||
| 00006262 | |||||||||
| 00006263 | |||||||||
| 00006264 | |||||||||
| 00115529 | |||||||||
| 00115530 | |||||||||
| Ortholog (23) | |||||||||
| Paralog | WBGene00011913 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WBGene00015969 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00008957 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00011251 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00007741 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00011287 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00012441 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00012461 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00016184 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00018486 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Concise_description | glb-3 encodes a globin with no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00025067 | |||||
| WBPaper00031066 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Dec 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxygen binding activity and oxygen carrier activity. Predicted to be involved in oxygen transport and response to hypoxia. Expressed in neurons; non-striated muscle; and somatic nervous system. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06H2.5a | |||||||
| C06H2.5b | |||||||||
| Corresponding_CDS_history | C06H2.5:wp195 | ||||||||
| Corresponding_transcript | C06H2.5a.1 | ||||||||
| C06H2.5a.2 | |||||||||
| C06H2.5b.1 | |||||||||
| Other_sequence | FC555670.1 | ||||||||
| Dviv_isotig15296 | |||||||||
| Tcir_isotig07275 | |||||||||
| Oden_isotig24399 | |||||||||
| Acan_isotig11907 | |||||||||
| Dviv_isotig15295 | |||||||||
| ACC25156_1 | |||||||||
| FC553763.1 | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00039954 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010352 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028607 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8483 | ||||||||
| Expr16387 | |||||||||
| Expr1020908 | |||||||||
| Expr1144029 | |||||||||
| Expr2012072 | |||||||||
| Expr2030308 | |||||||||
| Drives_construct | WBCnstr00013311 | ||||||||
| WBCnstr00042988 | |||||||||
| Construct_product | WBCnstr00042988 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction | WBInteraction000311198 | ||||||||
| WBInteraction000373245 | |||||||||
| WBInteraction000383587 | |||||||||
| WBInteraction000583607 | |||||||||
| Map_info | Map | V | Position | 2.95702 | Error | 0.000554 | |||
| Positive | Positive_clone | C06H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031066 | ||||||||
| WBPaper00064843 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
