WormBase Tree Display for Gene: WBGene00016184
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| WBGene00016184 | SMap | S_parent | Sequence | C28F5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | glb-9 | Paper_evidence | WBPaper00031066 | |||||
| Person_evidence | WBPerson1540 | ||||||||
| Sequence_name | C28F5.2 | ||||||||
| Molecular_name (18) | |||||||||
| Other_name | CELE_C28F5.2 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | glb-9 | ||||||||
| DB_info | Database | AceView | gene | 2H798 | |||||
| WormQTL | gene | WBGene00016184 | |||||||
| WormFlux | gene | WBGene00016184 | |||||||
| NDB | locus_tag | CELE_C28F5.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00016184|UniProtKB=Q09240 | |||||||
| family | PTHR46458 | ||||||||
| NCBI | gene | 182985 | |||||||
| RefSeq | protein | NM_001383889.1 | |||||||
| NM_001368599.1 | |||||||||
| NM_001368598.4 | |||||||||
| NM_001368597.3 | |||||||||
| NM_063171.7 | |||||||||
| SwissProt | UniProtAcc | Q09240 | |||||||
| TrEMBL | UniProtAcc | A0A3B1DQ87 | |||||||
| A0A3B1E8S0 | |||||||||
| A0A3B1E9Z1 | |||||||||
| A0A3B1E4T2 | |||||||||
| UniProt_GCRP | UniProtAcc | Q09240 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Oct 2007 15:16:41 | WBPerson2970 | Name_change | CGC_name | glb-9 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | glb | ||||||||
| Allele (137) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Concise_description | glb-9 encodes a globin with no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00025067 | |||||
| WBPaper00031066 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Dec 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxygen binding activity and oxygen carrier activity. Predicted to be involved in oxygen transport and response to hypoxia. Expressed in neurons and somatic nervous system. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C28F5.2a | |||||||
| C28F5.2b | |||||||||
| C28F5.2c | |||||||||
| C28F5.2d | |||||||||
| C28F5.2e | |||||||||
| Corresponding_CDS_history | C28F5.2:wp156 | ||||||||
| C28F5.2:wp172 | |||||||||
| Corresponding_transcript | C28F5.2a.1 | ||||||||
| C28F5.2a.2 | |||||||||
| C28F5.2b.1 | |||||||||
| C28F5.2c.1 | |||||||||
| C28F5.2c.2 | |||||||||
| C28F5.2c.3 | |||||||||
| C28F5.2d.1 | |||||||||
| C28F5.2e.1 | |||||||||
| Other_sequence | Oden_isotig20673 | ||||||||
| Dviv_isotig18716 | |||||||||
| AE03704 | |||||||||
| AYC02881_1 | |||||||||
| Acan_isotig11320 | |||||||||
| AE00334 | |||||||||
| Associated_feature | WBsf665694 | ||||||||
| WBsf988465 | |||||||||
| WBsf988466 | |||||||||
| WBsf1012546 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011302 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041417 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041416 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8489 | ||||||||
| Expr1026990 | |||||||||
| Expr1145447 | |||||||||
| Expr2012078 | |||||||||
| Expr2030314 | |||||||||
| Drives_construct | WBCnstr00013317 | ||||||||
| WBCnstr00028263 | |||||||||
| Construct_product | WBCnstr00028263 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (122) | |||||||||
| Interaction | WBInteraction000182846 | ||||||||
| WBInteraction000194637 | |||||||||
| WBInteraction000206478 | |||||||||
| WBInteraction000250334 | |||||||||
| WBInteraction000294493 | |||||||||
| WBInteraction000308407 | |||||||||
| Map_info | Map | II | Position | 0.503546 | Error | 2.5e-05 | |||
| Positive | Positive_clone | C28F5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031066 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
