WormBase Tree Display for Gene: WBGene00007385
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| WBGene00007385 | SMap | S_parent | Sequence | C06H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | atp-5 | Person_evidence | WBPerson1157 | |||||
| Sequence_name | C06H2.1 | ||||||||
| Molecular_name | C06H2.1 | ||||||||
| C06H2.1.1 | |||||||||
| CE15602 | |||||||||
| Other_name | phi-39 | Person_evidence | WBPerson2582 | ||||||
| CELE_C06H2.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | atp-5 | ||||||||
| DB_info | Database | AceView | gene | 5L602 | |||||
| WormQTL | gene | WBGene00007385 | |||||||
| WormFlux | gene | WBGene00007385 | |||||||
| NDB | locus_tag | CELE_C06H2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007385|UniProtKB=Q17763 | |||||||
| family | PTHR12700 | ||||||||
| NCBI | gene | 179541 | |||||||
| RefSeq | protein | NM_073428.7 | |||||||
| TREEFAM | TREEFAM_ID | TF314031 | |||||||
| TrEMBL | UniProtAcc | Q17763 | |||||||
| UniProt_GCRP | UniProtAcc | Q17763 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 31 Aug 2005 14:07:05 | WBPerson2970 | Name_change | CGC_name | atp-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | atp | ||||||||
| Allele (17) | |||||||||
| Strain | WBStrain00051141 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Contained_in_operon | CEOP5272 | ||||||||
| Ortholog (33) | |||||||||
| Structured_description | Automated_description | Predicted to enable proton transmembrane transporter activity. Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven ATP synthesis. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial proton-transporting ATP synthase, stator stalk. Is an ortholog of human ATP5PD (ATP synthase peripheral stalk subunit d). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C06H2.1 | |||||||
| Corresponding_transcript | C06H2.1.1 | ||||||||
| Other_sequence (90) | |||||||||
| Associated_feature | WBsf668678 | ||||||||
| WBsf669359 | |||||||||
| WBsf234506 | |||||||||
| WBsf234507 | |||||||||
| WBsf234508 | |||||||||
| Experimental_info | RNAi_result (21) | ||||||||
| Expr_pattern | Expr1010806 | ||||||||
| Expr1033178 | |||||||||
| Expr1144025 | |||||||||
| Expr2009513 | |||||||||
| Expr2027750 | |||||||||
| Drives_construct | WBCnstr00033782 | ||||||||
| Construct_product | WBCnstr00033782 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction (118) | |||||||||
| Map_info | Map | V | Position | 2.95246 | Error | 0.000469 | |||
| Positive | Positive_clone | C06H2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026715 | ||||||||
| WBPaper00028999 | |||||||||
| WBPaper00037615 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060452 | |||||||||
| WBPaper00061870 | |||||||||
| WBPaper00062370 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
