WormBase Tree Display for Gene: WBGene00007385

WBGene00007385 SMap: S_parent: Sequence: C06H2
  Identity: Version: 2
    Name: CGC_name: atp-5 Person_evidence: WBPerson1157
      Sequence_name: C06H2.1
      Molecular_name: C06H2.1
        C06H2.1.1
        CE15602
      Other_name: phi-39 Person_evidence: WBPerson2582
        CELE_C06H2.1 Accession_evidence: NDB BX284605
      Public_name: atp-5
    DB_info: Database: AceView gene 5L602
        WormQTL gene WBGene00007385
        WormFlux gene WBGene00007385
        NDB locus_tag CELE_C06H2.1
        Panther gene CAEEL|WormBase=WBGene00007385|UniProtKB=Q17763
          family PTHR12700
        NCBI gene 179541
        RefSeq protein NM_073428.7
        TREEFAM TREEFAM_ID TF314031
        TrEMBL UniProtAcc Q17763
        UniProt_GCRP UniProtAcc Q17763
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 31 Aug 2005 14:07:05 WBPerson2970 Name_change: CGC_name: atp-5
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: atp
    Allele (17)
    Strain: WBStrain00051141
    RNASeq_FPKM (74)
    GO_annotation (12)
    Contained_in_operon: CEOP5272
    Ortholog: WBGene00071501 Caenorhabditis remanei From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00041525 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00141346 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00120724 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00118769 Pristionchus pacificus From_analysis: OMA
      WBGene00154260 Caenorhabditis brenneri From_analysis: WormBase-Compara
      CBOVI.g1047 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g7444 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g21757 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g4692 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g18239 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g1133 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g6705 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g15231 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g15840 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g2140 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cni-atp-5 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold417.g1128 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_19978 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_016630 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g03699 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g21881 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_50313100 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrV_pilon.g15693 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00261623 Strongyloides ratti From_analysis: WormBase-Compara
      SGD:S000001499 Saccharomyces cerevisiae From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
      FB:FBgn0285943 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      FB:FBgn0016120 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040426-1658 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
            PhylomeDB
      HGNC:845 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
            PhylomeDB
      MGI:1918929 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
            PhylomeDB
      RGD:1560316 Rattus norvegicus From_analysis: EnsEMBL-Compara
            OrthoFinder
            Panther
      RGD:620083 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OrthoFinder
            Panther
    Structured_description: Automated_description: Predicted to enable proton transmembrane transporter activity. Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven ATP synthesis. Predicted to be located in mitochondrial inner membrane. Predicted to be part of mitochondrial proton-transporting ATP synthase, stator stalk. Is an ortholog of human ATP5PD (ATP synthase peripheral stalk subunit d). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C06H2.1
    Corresponding_transcript: C06H2.1.1
    Other_sequence (90)
    Associated_feature: WBsf668678
      WBsf669359
      WBsf234506
      WBsf234507
      WBsf234508
  Experimental_info: RNAi_result (21)
    Expr_pattern: Expr1010806
      Expr1033178
      Expr1144025
      Expr2009513
      Expr2027750
    Drives_construct: WBCnstr00033782
    Construct_product: WBCnstr00033782
    Microarray_results (21)
    Expression_cluster (124)
    Interaction (118)
  Map_info: Map: V Position: 2.95246 Error: 0.000469
    Positive: Positive_clone: C06H2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00026715
    WBPaper00028999
    WBPaper00037615
    WBPaper00038491
    WBPaper00055090
    WBPaper00060452
    WBPaper00061870
    WBPaper00062370
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene