WormBase Tree Display for Gene: WBGene00007303
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WBGene00007303 | SMap | S_parent | Sequence | C04F12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | rnh-1.3 | Paper_evidence | WBPaper00027023 | |||
Sequence_name | C04F12.9 | ||||||
Molecular_name | C04F12.9 | ||||||
C04F12.9.1 | |||||||
CE19682 | |||||||
Other_name | CELE_C04F12.9 | Accession_evidence | NDB | BX284601 | |||
Public_name | rnh-1.3 | ||||||
DB_info | Database | AceView | gene | 1K286 | |||
WormQTL | gene | WBGene00007303 | |||||
WormFlux | gene | WBGene00007303 | |||||
NDB | locus_tag | CELE_C04F12.9 | |||||
Panther | gene | CAEEL|WormBase=WBGene00007303|UniProtKB=Q9XVE6 | |||||
family | PTHR10642 | ||||||
NCBI | gene | 182229 | |||||
RefSeq | protein | NM_060180.4 | |||||
TrEMBL | UniProtAcc | Q9XVE6 | |||||
UniProt_GCRP | UniProtAcc | Q9XVE6 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | rnh | ||||||
Allele (14) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00102392 | ||||||
00102393 | |||||||
00102394 | |||||||
00102395 | |||||||
00115472 | |||||||
00115473 | |||||||
Ortholog (12) | |||||||
Paralog | WBGene00004382 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00011664 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00022888 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00010787 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Concise_description | rnh-1.3 is one of four C. elegans genes that can encode an RNase H ribonuclease; rnh-1.3 transcripts are expressed from the L3 larval stage through adulthood. | Paper_evidence | WBPaper00027023 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 25 Feb 2014 00:00:00 | ||||||
Automated_description | Predicted to enable RNA-DNA hybrid ribonuclease activity. Predicted to be involved in DNA replication, removal of RNA primer. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C04F12.9 | |||||
Corresponding_transcript | C04F12.9.1 | ||||||
Associated_feature | WBsf649508 | ||||||
WBsf984787 | |||||||
WBsf220133 | |||||||
Experimental_info | RNAi_result | WBRNAi00039636 | Inferred_automatically | RNAi_primary | |||
WBRNAi00002906 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00028445 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007557 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1024186 | ||||||
Expr1143732 | |||||||
Expr2015388 | |||||||
Expr2033622 | |||||||
Drives_construct | WBCnstr00022353 | ||||||
WBCnstr00033845 | |||||||
Construct_product | WBCnstr00022353 | ||||||
WBCnstr00033845 | |||||||
Microarray_results (17) | |||||||
Expression_cluster (251) | |||||||
Interaction (43) | |||||||
Map_info | Map | I | Position | 3.85722 | Error | 0.000888 | |
Positive | Positive_clone | C04F12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00027023 | ||||||
WBPaper00027111 | |||||||
WBPaper00027683 | |||||||
WBPaper00031477 | |||||||
WBPaper00036231 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |