WormBase Tree Display for Gene: WBGene00007223
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| WBGene00007223 | SMap | S_parent | Sequence | C01F6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | znf-706 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C01F6.9 | ||||||||
| Molecular_name | C01F6.9a | ||||||||
| C01F6.9a.1 | |||||||||
| CE17361 | |||||||||
| C01F6.9c | |||||||||
| CE49692 | |||||||||
| C01F6.9c.1 | |||||||||
| Other_name | CELE_C01F6.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | znf-706 | ||||||||
| DB_info | Database | AceView | gene | 4J862 | |||||
| WormQTL | gene | WBGene00007223 | |||||||
| WormFlux | gene | WBGene00007223 | |||||||
| NDB | locus_tag | CELE_C01F6.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007223|UniProtKB=G5EDA6 | |||||||
| family | PTHR21213 | ||||||||
| NCBI | gene | 177731 | |||||||
| RefSeq | protein | NM_001307137.1 | |||||||
| NM_069182.4 | |||||||||
| TrEMBL | UniProtAcc | X5M911 | |||||||
| G5EDA6 | |||||||||
| UniProt_GCRP | UniProtAcc | G5EDA6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 19 Apr 2021 01:27:01 | WBPerson1983 | Name_change | CGC_name | znf-706 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | znf | ||||||||
| Allele | WBVar01500079 | ||||||||
| WBVar01498996 | |||||||||
| WBVar00296410 | |||||||||
| WBVar01499228 | |||||||||
| WBVar00930131 | |||||||||
| WBVar02058314 | |||||||||
| WBVar01498928 | |||||||||
| WBVar01500245 | |||||||||
| Strain | WBStrain00034992 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00013628 | ||||||||
| 00013629 | |||||||||
| 00013630 | |||||||||
| 00013631 | |||||||||
| Contained_in_operon | CEOP4324 | ||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00019609 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The C01F6.9 gene resides in an operon that also contains the genes icl-1 and lpl-1. | Paper_evidence | WBPaper00005113 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be located in cytoplasm and nucleus. Is an ortholog of human ZNF706 (zinc finger protein 706). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C01F6.9a | |||||||
| C01F6.9c | |||||||||
| Corresponding_CDS_history | C01F6.9b:wp274 | ||||||||
| Corresponding_transcript | C01F6.9a.1 | ||||||||
| C01F6.9c.1 | |||||||||
| Other_sequence (31) | |||||||||
| Associated_feature | WBsf652037 | ||||||||
| WBsf978637 | |||||||||
| WBsf997354 | |||||||||
| WBsf1017924 | |||||||||
| WBsf230513 | |||||||||
| Transcription_factor | WBTranscriptionFactor000948 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00000971 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00039319 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009923 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028287 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023049 | ||||||||
| Expr1033115 | |||||||||
| Expr1143430 | |||||||||
| Expr1200276 | |||||||||
| Expr2000287 | |||||||||
| Expr2018509 | |||||||||
| Drives_construct | WBCnstr00033908 | ||||||||
| Construct_product | WBCnstr00016534 | ||||||||
| WBCnstr00022556 | |||||||||
| WBCnstr00033908 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (89) | |||||||||
| Interaction | WBInteraction000370111 | ||||||||
| WBInteraction000547044 | |||||||||
| Map_info | Map | IV | Position | 4.03943 | |||||
| Positive | Positive_clone | C01F6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | [210510 skd] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (4.03509) | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| [220202 skd] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (4.03509) | |||||||||
| Method | Gene |
