WormBase Tree Display for Gene: WBGene00007223

WBGene00007223 SMap: S_parent: Sequence: C01F6
  Identity: Version: 2
    Name: CGC_name: znf-706 Person_evidence: WBPerson260
      Sequence_name: C01F6.9
      Molecular_name: C01F6.9a
        C01F6.9a.1
        CE17361
        C01F6.9c
        CE49692
        C01F6.9c.1
      Other_name: CELE_C01F6.9 Accession_evidence: NDB BX284604
      Public_name: znf-706
    DB_info: Database: AceView gene 4J862
        WormQTL gene WBGene00007223
        WormFlux gene WBGene00007223
        NDB locus_tag CELE_C01F6.9
        Panther gene CAEEL|WormBase=WBGene00007223|UniProtKB=G5EDA6
          family PTHR21213
        NCBI gene 177731
        RefSeq protein NM_001307137.1
            NM_069182.4
        TrEMBL UniProtAcc X5M911
            G5EDA6
        UniProt_GCRP UniProtAcc G5EDA6
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 19 Apr 2021 01:27:01 WBPerson1983 Name_change: CGC_name: znf-706
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: znf
    Allele: WBVar01500079
      WBVar01498996
      WBVar00296410
      WBVar01499228
      WBVar00930131
      WBVar02058314
      WBVar01498928
      WBVar01500245
    Strain: WBStrain00034992
    RNASeq_FPKM (74)
    GO_annotation: 00013628
      00013629
      00013630
      00013631
    Contained_in_operon: CEOP4324
    Ortholog: WBGene00073659 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00040461 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00155818 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00122281 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00091140 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00063898 Caenorhabditis remanei From_analysis: TreeFam
      WBGene00225231 Brugia malayi From_analysis: WormBase-Compara
      CBOVI.g8150 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP21.g13970 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g6 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g19242 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g4043 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g26699 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12356 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g16392 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g3358 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g12747 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00155.g5763 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cnig_chr_IV.g13032 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold630.g20273 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      FL83_16547 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_013340 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g01880 Oscheius tipulae From_analysis: WormBase-Compara
      Pan_g14607 Panagrellus redivivus From_analysis: WormBase-Compara
      Sp34_40352200 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrIV_pilon.g11234 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00240225 Onchocerca volvulus From_analysis: WormBase-Compara
      WBGene00258956 Strongyloides ratti From_analysis: WormBase-Compara
      WBGene00291139 Trichuris muris From_analysis: WormBase-Compara
      FB:FBgn0036537 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0036538 Drosophila melanogaster From_analysis: EnsEMBL-Compara
            Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-040808-48 Danio rerio From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      HGNC:24992 Homo sapiens From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
      MGI:1915286 Mus musculus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
      RGD:1563959 Rattus norvegicus From_analysis: EnsEMBL-Compara
            Hieranoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
    Paralog: WBGene00019609 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
    Structured_description: Concise_description: The C01F6.9 gene resides in an operon that also contains the genes icl-1 and lpl-1. Paper_evidence: WBPaper00005113
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to be located in cytoplasm and nucleus. Is an ortholog of human ZNF706 (zinc finger protein 706). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C01F6.9a
      C01F6.9c
    Corresponding_CDS_history: C01F6.9b:wp274
    Corresponding_transcript: C01F6.9a.1
      C01F6.9c.1
    Other_sequence (31)
    Associated_feature: WBsf652037
      WBsf978637
      WBsf997354
      WBsf1017924
      WBsf230513
    Transcription_factor: WBTranscriptionFactor000948
  Experimental_info: RNAi_result: WBRNAi00000971 Inferred_automatically: RNAi_primary
      WBRNAi00039319 Inferred_automatically: RNAi_primary
      WBRNAi00009923 Inferred_automatically: RNAi_primary
      WBRNAi00028287 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023049
      Expr1033115
      Expr1143430
      Expr1200276
      Expr2000287
      Expr2018509
    Drives_construct: WBCnstr00033908
    Construct_product: WBCnstr00016534
      WBCnstr00022556
      WBCnstr00033908
    Microarray_results (20)
    Expression_cluster (89)
    Interaction: WBInteraction000370111
      WBInteraction000547044
  Map_info: Map: IV Position: 4.03943
    Positive: Positive_clone: C01F6 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00055090
  Remark: [210510 skd] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (4.03509)
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [220202 skd] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (4.03509)
  Method: Gene