WormBase Tree Display for Gene: WBGene00007195

WBGene00007195 SMap: S_parent: Sequence: B0513
  Identity: Version: 2
    Name: CGC_name: thoc-7 Person_evidence: WBPerson1521
      Sequence_name: B0513.2
      Molecular_name: B0513.2a
        B0513.2a.1
        CE23510
        B0513.2b
        CE44713
        B0513.2a.2
        B0513.2b.1
      Other_name: CELE_B0513.2 Accession_evidence: NDB BX284604
      Public_name: thoc-7
    DB_info: Database: AceView gene 4O649
        WormQTL gene WBGene00007195
        WormFlux gene WBGene00007195
        NDB locus_tag CELE_B0513.2
        Panther gene CAEEL|WormBase=WBGene00007195|UniProtKB=Q9U3S3
          family PTHR23405
        NCBI gene 178353
        RefSeq protein NM_001268837.3
            NM_001268836.4
        TREEFAM TREEFAM_ID TF319308
        TrEMBL UniProtAcc Q9U3S3
            D3YT70
        UniProt_GCRP UniProtAcc Q9U3S3
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 02 May 2017 10:45:03 WBPerson2970 Name_change: CGC_name: thoc-7
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: thoc
    Allele (35)
    RNASeq_FPKM (74)
    GO_annotation: 00007520
      00007521
      00007522
      00100420
      00100421
      00115416
      00115417
    Contained_in_operon: CEOP4568
    Ortholog (28)
    Structured_description: Concise_description: B0513.2 encodes the C. elegans ortholog of mammalian THOC7, a subunit of the THO complex involved in mRNP biogenesis as part of transcription elongation, mRNA maturation, and export. Paper_evidence: WBPaper00041879
          Curator_confirmed: WBPerson1843
          Date_last_updated: 09 Jan 2013 00:00:00
      Automated_description: Predicted to be involved in mRNA export from nucleus. Predicted to be located in nucleus. Predicted to be part of THO complex part of transcription export complex. Is an ortholog of human THOC7 (THO complex subunit 7). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0513.2a
      B0513.2b
    Corresponding_CDS_history: B0513.2a:wp123
    Corresponding_transcript: B0513.2a.1
      B0513.2a.2
      B0513.2b.1
    Other_sequence (19)
    Associated_feature: WBsf998475
      WBsf998476
      WBsf1018580
      WBsf229465
      WBsf229466
  Experimental_info: RNAi_result: WBRNAi00039153 Inferred_automatically: RNAi_primary
      WBRNAi00028192 Inferred_automatically: RNAi_primary
      WBRNAi00039154 Inferred_automatically: RNAi_primary
      WBRNAi00000261 Inferred_automatically: RNAi_primary
      WBRNAi00061610 Inferred_automatically: RNAi_primary
      WBRNAi00009829 Inferred_automatically: RNAi_primary
      WBRNAi00076059 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025485
      Expr1033101
      Expr1143309
      Expr2017393
      Expr2035532
    Drives_construct: WBCnstr00033928
    Construct_product: WBCnstr00033928
    Microarray_results (25)
    Expression_cluster (138)
    SAGE_tag (11)
    Interaction (11)
  Map_info: Map: IV Position: 10.8988
    Positive: Positive_clone: B0513 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00041879
    WBPaper00052341
    WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene