WormBase Tree Display for Gene: WBGene00007170
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| WBGene00007170 | SMap | S_parent | Sequence | B0393 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | B0393.5 | |||||||
| Molecular_name | B0393.5 | ||||||||
| B0393.5.1 | |||||||||
| CE43273 | |||||||||
| Other_name | CELE_B0393.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | B0393.5 | ||||||||
| DB_info | Database | AceView | gene | 3F865 | |||||
| WormQTL | gene | WBGene00007170 | |||||||
| WormFlux | gene | WBGene00007170 | |||||||
| NDB | locus_tag | CELE_B0393.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00007170|UniProtKB=Q17494 | |||||||
| family | PTHR24039 | ||||||||
| NCBI | gene | 175632 | |||||||
| RefSeq | protein | NM_065581.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315546 | |||||||
| TrEMBL | UniProtAcc | Q17494 | |||||||
| UniProt_GCRP | UniProtAcc | Q17494 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (116) | |||||||||
| Strain | WBStrain00031569 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00058279 | ||||||||
| 00058280 | |||||||||
| 00058281 | |||||||||
| 00058282 | |||||||||
| 00115385 | |||||||||
| 00115386 | |||||||||
| Ortholog (11) | |||||||||
| Paralog | WBGene00003173 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00003482 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00003497 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022816 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable calcium ion binding activity. Predicted to be an extracellular matrix structural constituent. Predicted to be involved in cell-matrix adhesion. Predicted to be located in collagen-containing extracellular matrix and membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0393.5 | |||||||
| Corresponding_CDS_history | B0393.5:wp196 | ||||||||
| Corresponding_transcript | B0393.5.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009744 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00068245 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039010 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039011 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000448 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005018 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006794 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1016853 | ||||||||
| Expr1033085 | |||||||||
| Expr1143175 | |||||||||
| Expr2000169 | |||||||||
| Expr2018387 | |||||||||
| Drives_construct | WBCnstr00033950 | ||||||||
| Construct_product | WBCnstr00033950 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (238) | |||||||||
| Interaction (20) | |||||||||
| Map_info | Positive | Positive_clone | B0393 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -2.56131 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065560 | |||||||||
| Method | Gene |
