WormBase Tree Display for Gene: WBGene00007143

WBGene00007143 SMap: S_parent: Sequence: B0334
  Identity: Version: 2
    Name: CGC_name: hacl-1 Person_evidence: WBPerson7188
          Author_evidence: Bennett Fox
      Sequence_name: B0334.3
      Molecular_name: B0334.3a
        B0334.3a.1
        CE19658
        B0334.3b
        CE46937
        B0334.3b.1
      Other_name: CELE_B0334.3 Accession_evidence: NDB BX284602
      Public_name: hacl-1
    DB_info: Database: AceView gene 2L780
        WormQTL gene WBGene00007143
        WormFlux gene WBGene00007143
        NDB locus_tag CELE_B0334.3
        Panther gene CAEEL|WormBase=WBGene00007143|UniProtKB=Q17474
          family PTHR43710
        NCBI gene 174758
        RefSeq protein NM_064053.6
            NM_001393195.1
        TREEFAM TREEFAM_ID TF105690
        TrEMBL UniProtAcc Q17474
            Q17475
        UniProt_GCRP UniProtAcc Q17474
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 14 Jun 2021 10:43:28 WBPerson1983 Name_change: CGC_name: hacl-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: hacl
    Allele (59)
    RNASeq_FPKM (74)
    GO_annotation: 00058250
      00058251
      00058252
      00058253
      00115366
      00115367
      00115368
    Contained_in_operon: CEOP2544
    Ortholog (41)
    Paralog: WBGene00020831 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable thiamine pyrophosphate binding activity. Predicted to be involved in fatty acid alpha-oxidation. Predicted to be located in peroxisome. Is an ortholog of human HACL1 (2-hydroxyacyl-CoA lyase 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0334.3a
      B0334.3b
    Corresponding_CDS_history: B0334.3b:wp229
    Corresponding_transcript: B0334.3a.1
      B0334.3b.1
    Other_sequence (30)
    Associated_feature: WBsf650584
      WBsf650585
      WBsf665275
      WBsf666144
      WBsf666145
      WBsf666146
  Experimental_info: RNAi_result: WBRNAi00090933 Inferred_automatically: RNAi_primary
      WBRNAi00038929 Inferred_automatically: RNAi_primary
      WBRNAi00009705 Inferred_automatically: RNAi_primary
      WBRNAi00038928 Inferred_automatically: RNAi_primary
      WBRNAi00028088 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023868
      Expr1033074
      Expr1143113
      Expr2000142
      Expr2018360
    Drives_construct: WBCnstr00033967
    Construct_product: WBCnstr00033967
    Microarray_results (23)
    Expression_cluster (137)
    Interaction (29)
  Map_info: Map: II Position: 3.51255
    Positive: Positive_clone: B0334 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00041022
    WBPaper00055090
    WBPaper00062489
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene