WormBase Tree Display for Gene: WBGene00007139

WBGene00007139 SMap: S_parent: Sequence: B0285
  Identity: Version: 2
    Name: CGC_name: mnp-1 Paper_evidence: WBPaper00031840
          Person_evidence: WBPerson2244
            WBPerson237
      Sequence_name: B0285.7
      Molecular_name: B0285.7
        B0285.7.1
        CE00646
      Other_name: CELE_B0285.7 Accession_evidence: NDB BX284603
      Public_name: mnp-1
    DB_info: Database: AceView gene 3F453
        WormQTL gene WBGene00007139
        WormFlux gene WBGene00007139
        NDB locus_tag CELE_B0285.7
        Panther gene CAEEL|WormBase=WBGene00007139|UniProtKB=P46557
          family PTHR11533
        NCBI gene 175564
        RefSeq protein NM_065477.6
        SwissProt UniProtAcc P46557
        UniProt_GCRP UniProtAcc P46557
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 09 May 2008 10:32:24 WBPerson2970 Name_change: CGC_name: mnp-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: mnp
    Allele (100)
    Strain: WBStrain00002163
      WBStrain00032571
      WBStrain00055655
    RNASeq_FPKM (74)
    GO_annotation: 00046355
      00046356
      00046357
      00046358
      00046359
      00046360
    Ortholog (33)
    Structured_description: Concise_description: mnp-1 encodes a protein related to the M1 family of metalloproteinases, but whose sequence indicates that it is unlikely to be catalytically active (MNP-1 lacks three of the four essential zinc-binding amino acids); during embryonic development mnp-1 activity is required, likely cell autonomously, for migration of muscle cells from their lateral positions to their final positions close to the dorsal and ventral midlines and for proper body morphology; an MNP-1::GFP reporter fusion localizes to the plasma membrane and is expressed from the 400-cell stage of embryogenesis through the early first larval stage in body-wall muscle, the Z1 and Z4 somatic gonad precursors, and cells in the dorsal anterior region that are likely to be neuronal precursors. Paper_evidence: WBPaper00031840
          Curator_confirmed: WBPerson1843
          Date_last_updated: 05 May 2008 00:00:00
      Automated_description: Predicted to be located in cytoplasm. Expressed in Z1; Z4; body wall musculature; neuroblasts; and neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0285.7
    Corresponding_transcript: B0285.7.1
    Other_sequence: CJC04433_1
      CR03904
      CRC09344_1
    Associated_feature (14)
  Experimental_info: RNAi_result (11)
    Expr_pattern: Chronogram1270
      Expr5040
      Expr12667
      Expr13910
      Expr1013645
      Expr1033073
      Expr1143065
      Expr2013632
      Expr2031866
    Drives_construct: WBCnstr00002922
      WBCnstr00022733
      WBCnstr00022734
      WBCnstr00033970
      WBCnstr00040241
    Construct_product: WBCnstr00022733
      WBCnstr00033970
      WBCnstr00040241
    Microarray_results (22)
    Expression_cluster (230)
    Interaction: WBInteraction000052841
      WBInteraction000052845
      WBInteraction000164322
      WBInteraction000171558
      WBInteraction000185344
      WBInteraction000186713
      WBInteraction000189956
      WBInteraction000193230
      WBInteraction000198302
      WBInteraction000199747
      WBInteraction000202133
      WBInteraction000202172
      WBInteraction000204084
      WBInteraction000210575
      WBInteraction000212819
      WBInteraction000215560
      WBInteraction000218372
      WBInteraction000220923
      WBInteraction000220990
      WBInteraction000223592
      WBInteraction000225103
      WBInteraction000229088
      WBInteraction000230954
      WBInteraction000232114
      WBInteraction000234596
      WBInteraction000234668
      WBInteraction000239730
      WBInteraction000246207
      WBInteraction000249024
      WBInteraction000249847
      WBInteraction000250470
      WBInteraction000254497
      WBInteraction000255043
      WBInteraction000256382
      WBInteraction000257661
      WBInteraction000259356
      WBInteraction000260129
      WBInteraction000260712
      WBInteraction000261378
      WBInteraction000263216
      WBInteraction000263434
      WBInteraction000268107
      WBInteraction000269072
      WBInteraction000269438
      WBInteraction000270361
      WBInteraction000278676
      WBInteraction000288774
      WBInteraction000292497
      WBInteraction000293851
      WBInteraction000294437
      WBInteraction000294829
      WBInteraction000295418
      WBInteraction000297954
      WBInteraction000298321
      WBInteraction000299405
      WBInteraction000302940
      WBInteraction000304456
      WBInteraction000308022
      WBInteraction000309148
      WBInteraction000309769
      WBInteraction000312205
      WBInteraction000314540
      WBInteraction000315923
      WBInteraction000317388
      WBInteraction000319182
      WBInteraction000331772
      WBInteraction000332010
      WBInteraction000345057
      WBInteraction000346899
      WBInteraction000346964
      WBInteraction000348314
      WBInteraction000354743
      WBInteraction000355428
      WBInteraction000355510
      WBInteraction000356374
      WBInteraction000360762
      WBInteraction000361426
      WBInteraction000361959
      WBInteraction000363218
      WBInteraction000363259
      WBInteraction000363969
      WBInteraction000364699
      WBInteraction000366823
      WBInteraction000367091
      WBInteraction000367894
      WBInteraction000368574
      WBInteraction000375257
      WBInteraction000375668
      WBInteraction000378607
      WBInteraction000379390
      WBInteraction000383426
      WBInteraction000392508
      WBInteraction000396929
      WBInteraction000398907
      WBInteraction000401398
      WBInteraction000404523
      WBInteraction000404998
      WBInteraction000408458
      WBInteraction000408590
      WBInteraction000414125
      WBInteraction000414816
      WBInteraction000416858
      WBInteraction000416908
      WBInteraction000417080
      WBInteraction000417338
      WBInteraction000420196
      WBInteraction000423438
      WBInteraction000423600
      WBInteraction000425127
      WBInteraction000425922
      WBInteraction000427910
      WBInteraction000429057
      WBInteraction000429069
      WBInteraction000431120
      WBInteraction000437394
      WBInteraction000438414
      WBInteraction000441610
      WBInteraction000443445
      WBInteraction000446359
      WBInteraction000446778
      WBInteraction000447622
      WBInteraction000447822
      WBInteraction000450430
      WBInteraction000458492
      WBInteraction000459288
      WBInteraction000460827
      WBInteraction000462296
      WBInteraction000573628
  Map_info: Map: III Position: -3.18292 Error: 0.000721
    Positive: Positive_clone: B0285 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031840
    WBPaper00050854
    WBPaper00065732
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene