WormBase Tree Display for Gene: WBGene00007063
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| WBGene00007063 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | 2L52.1 | |||||||
| Molecular_name | 2L52.1a | ||||||||
| 2L52.1a.1 | |||||||||
| CE32090 | |||||||||
| 2L52.1b | |||||||||
| CE50569 | |||||||||
| 2L52.1b.1 | |||||||||
| Other_name | CELE_2L52.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | 2L52.1 | ||||||||
| DB_info | Database | AceView | gene | 2A293 | |||||
| WormQTL | gene | WBGene00007063 | |||||||
| WormFlux | gene | WBGene00007063 | |||||||
| NDB | locus_tag | CELE_2L52.1 | |||||||
| NCBI | gene | 181792 | |||||||
| RefSeq | protein | NM_001381282.1 | |||||||
| NM_001381281.3 | |||||||||
| TrEMBL | UniProtAcc | A4F336 | |||||||
| A0A0K3AWR5 | |||||||||
| UniProt_GCRP | UniProtAcc | A4F336 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:47 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (51) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (13) | |||||||||
| Structured_description | Concise_description | 2L52.1 encodes a protein with sequence similarity to GLI-family zinc-finger transcription factors; deletion mutations in 2L52.1 are reported to be homozygous viable. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 10 Jan 2008 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABalaaaala; ABalaapaaa; ABalppappa; ABarappppa; and sensory neurons based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq and microarray studies. Is affected by five chemicals including rotenone; D-glucose; and stavudine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Zinc finger C2H2-type. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | 2L52.1a | |||||||
| 2L52.1b | |||||||||
| Corresponding_CDS_history | 2L52.1:wp89 | ||||||||
| Corresponding_transcript | 2L52.1a.1 | ||||||||
| 2L52.1b.1 | |||||||||
| Other_sequence | CR08584 | ||||||||
| CJC06287_1 | |||||||||
| CRC09474_1 | |||||||||
| Associated_feature | WBsf643882 | ||||||||
| WBsf657225 | |||||||||
| Transcription_factor | WBTranscriptionFactor000227 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00009506 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00038585 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038584 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010242 | ||||||||
| Expr1033035 | |||||||||
| Expr1142792 | |||||||||
| Expr2000000 | |||||||||
| Expr2018215 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (82) | |||||||||
| Interaction | WBInteraction000257612 | ||||||||
| WBInteraction000561087 | |||||||||
| Map_info | Positive | Positive_clone | 2L52 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -18.0211 | |||||||
| Method | Gene |
