WormBase Tree Display for Gene: WBGene00007001

WBGene00007001 Evidence: Paper_evidence: WBPaper00005431
  SMap: S_parent: Sequence: C43E11
  Identity: Version: 3
    Name: CGC_name: tufm-2 Paper_evidence: WBPaper00005431
          Person_evidence: WBPerson4204
      Sequence_name: C43E11.4
      Molecular_name: C43E11.4
        C43E11.4.1
        CE32610
      Other_name: EF-Tu2
        CELE_C43E11.4 Accession_evidence: NDB BX284601
      Public_name: tufm-2
    DB_info: Database: AceView gene 1E817
        WormQTL gene WBGene00007001
        WormFlux gene WBGene00007001
        NDB locus_tag CELE_C43E11.4
        Panther gene CAEEL|WormBase=WBGene00007001|UniProtKB=G5EDF5
          family PTHR43721
        NCBI gene 172024
        RefSeq protein NM_058937.6
        TREEFAM TREEFAM_ID TF300432
        TrEMBL UniProtAcc G5EDF5
        UniProt_GCRP UniProtAcc G5EDF5
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 12:35:33 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 22 Nov 2005 11:04:11 WBPerson2970 Name_change: CGC_name: tufm-2
        3 10 Jun 2014 12:12:12 WBPerson1983 Event: Acquires_merge: WBGene00016604
      Acquires_merge: WBGene00016604
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: tufm
    Allele (22)
    Strain: WBStrain00037196
    RNASeq_FPKM (74)
    GO_annotation: 00013923
      00013924
      00013925
      00013926
      00013927
      00013928
      00013929
      00013930
      00115185
      00115186
    Contained_in_operon: CEOP1164
    Ortholog (35)
    Paralog (17)
    Structured_description: Concise_description: tufm-2 encodes the C. elegans ortholog of the mitochondrial TU elongation Factor (EF-Tu); loss of tufm-2 activity activates the mitochondrial unfolded protein response. Paper_evidence: WBPaper00024269
          Curator_confirmed: WBPerson1843
          Date_last_updated: 10 Apr 2014 00:00:00
      Automated_description: Predicted to enable translation elongation factor activity. Predicted to be involved in mitochondrial translational elongation. Predicted to be located in mitochondrion. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C43E11.4
    Corresponding_CDS_history: C43E11.4:wp90
    Corresponding_transcript: C43E11.4.1
    Other_sequence (52)
    Associated_feature: WBsf643198
      WBsf656181
      WBsf217505
      WBsf217506
      WBsf217507
  Experimental_info: RNAi_result: WBRNAi00003142 Inferred_automatically: RNAi_primary
      WBRNAi00024804 Inferred_automatically: RNAi_primary
      WBRNAi00024805 Inferred_automatically: RNAi_primary
      WBRNAi00042383 Inferred_automatically: RNAi_primary
      WBRNAi00028233 Inferred_automatically: RNAi_primary
      WBRNAi00008007 Inferred_automatically: RNAi_primary
      WBRNAi00084350 Inferred_automatically: RNAi_primary
      WBRNAi00090953 Inferred_automatically: RNAi_primary
      WBRNAi00001024 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023010
      Expr1032996
      Expr1146372
      Expr2017635
      Expr2035775
    Drives_construct: WBCnstr00034045
    Construct_product: WBCnstr00034045
    Microarray_results (22)
    Expression_cluster (137)
    Interaction (70)
  Map_info: Map: I Position: -1.54448 Error: 0.002754
    Positive: Positive_clone: C43E11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005431
    WBPaper00005623
    WBPaper00026703
    WBPaper00028463
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    [140610 pad] Gene was missing Acquires_merge Event history data so inferred from Acquires_merge tag.
  Method: Gene