WormBase Tree Display for Gene: WBGene00006931
expand all nodes | collapse all nodes | view schema
| WBGene00006931 | Evidence | Person_evidence | WBPerson342 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | T20D3 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | vps-26 | |||||||
| Sequence_name | T20D3.7 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | CELE_T20D3.7 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | vps-26 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | vps | ||||||||
| Allele (38) | |||||||||
| Strain | WBStrain00034981 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024445 | ||||||||
| 00024446 | |||||||||
| 00024447 | |||||||||
| 00024448 | |||||||||
| 00024449 | |||||||||
| 00105901 | |||||||||
| 00115046 | |||||||||
| Contained_in_operon | CEOP4328 | ||||||||
| Ortholog (42) | |||||||||
| Structured_description | Automated_description | Predicted to be involved in intracellular protein transport and retrograde transport, endosome to Golgi. Located in cytosol. Is an ortholog of human VPS26B (VPS26 retromer complex component B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:9352 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12711) | ||||
| DOID:8947 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12711) | ||||||
| Molecular_info | Corresponding_CDS | T20D3.7a | |||||||
| T20D3.7b | |||||||||
| T20D3.7c | |||||||||
| T20D3.7d | |||||||||
| Corresponding_CDS_history | T20D3.7:wp57 | ||||||||
| Corresponding_transcript | T20D3.7a.1 | ||||||||
| T20D3.7b.1 | |||||||||
| T20D3.7c.1 | |||||||||
| T20D3.7d.1 | |||||||||
| Other_sequence (58) | |||||||||
| Associated_feature | WBsf652055 | ||||||||
| WBsf230558 | |||||||||
| WBsf230559 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00060741 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00101725 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00078329 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101726 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101722 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101723 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00081683 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00099091 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00035703 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060740 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018903 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101728 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053616 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097726 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101724 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00018904 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060739 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00053615 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101727 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00060738 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00101742 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3629 | ||||||||
| Expr1025195 | |||||||||
| Expr1032946 | |||||||||
| Expr1157174 | |||||||||
| Expr1200265 | |||||||||
| Expr2018017 | |||||||||
| Expr2036154 | |||||||||
| Drives_construct | WBCnstr00034089 | ||||||||
| Construct_product | WBCnstr00011554 | ||||||||
| WBCnstr00034089 | |||||||||
| Microarray_results | SMD_T20D3.6 | ||||||||
| SMD_T20D3.7 | |||||||||
| 175232_at | |||||||||
| 189949_at | |||||||||
| A_12_P101170 | |||||||||
| Aff_T20D3.7 | |||||||||
| GPL13394_WBGene00006931 | |||||||||
| GPL13914_T20D3.7 | |||||||||
| GPL14144_T20D3.7a_1036-1095_0.932_4_A | |||||||||
| GPL14144_T20D3.7a_582-641_0.922_7_B | |||||||||
| GPL14144_T20D3.7a_796-855_0.900_14_C | |||||||||
| GPL19516_CGZ0035707 | |||||||||
| GPL19516_CGZ0035708 | |||||||||
| GPL19516_CGZ0035709 | |||||||||
| GPL19516_CGZ0035710 | |||||||||
| GPL21109_T20D3.7a | |||||||||
| GPL3518_CE28684 | |||||||||
| GPL8304_CE_WBGene00006931_A | |||||||||
| GPL8673_T20D3_7P00361 | |||||||||
| GPL8673_T20D3_7P00385 | |||||||||
| GPL8673_T20D3_7P00891 | |||||||||
| GPL9450_T20D3.7 | |||||||||
| cea2.p.98815 | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (23) | |||||||||
| WBProcess | WBbiopr:00000073 | ||||||||
| Map_info | Map | IV | Position | 4.18807 | Error | 0.002989 | |||
| Positive | Positive_clone | T20D3 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Mapping_data | Multi_point | 5411 | |||||||
| 5673 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
