WormBase Tree Display for Gene: WBGene00006902

WBGene00006902 SMap: S_parent: Sequence: CHROMOSOME_I
  Identity: Version: 2
    Name: CGC_name: vet-6 Person_evidence: WBPerson698
      Sequence_name: F44F1.7
      Molecular_name: F44F1.7
        F44F1.7.1
        CE10424
      Other_name: CELE_F44F1.7 Accession_evidence: NDB BX284601
      Public_name: vet-6
    DB_info: Database: AceView gene 1N863
        WormQTL gene WBGene00006902
        WormFlux gene WBGene00006902
        NDB locus_tag CELE_F44F1.7
        Panther gene CAEEL|WormBase=WBGene00006902|UniProtKB=G5EEK5
          family PTHR21504
        NCBI gene 173191
        RefSeq protein NM_060931.9
        TREEFAM TREEFAM_ID TF322610
        TrEMBL UniProtAcc G5EEK5
        UniProt_GCRP UniProtAcc G5EEK5
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:43 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 16 Jul 2004 14:46:38 WBPerson1971 Event: Acquires_merge: WBGene00009699
      Acquires_merge: WBGene00009699
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vet
    Allele (47)
    Legacy_information: [C.elegansII] NMK. Abundant pre-gastrulation transcript. Encodes novel protein. vet-6:lacZ expressed in many cells from 28-cell stage to end of gastrulation. [Schauer and Wood 1990; BW]
    RNASeq_FPKM (74)
    GO_annotation: 00016400
      00016401
      00016402
      00114979
    Ortholog (25)
    Paralog (12)
    Structured_description: Concise_description: vet-6 encodes a protein that contains a spectrin repeat; vet-6 is preferentially transcribed in embryos prior to gastrulation. Paper_evidence: WBPaper00002526
            WBPaper00002567
            WBPaper00014776
          Curator_confirmed: WBPerson48
          Date_last_updated: 10 Jan 2005 00:00:00
      Automated_description: Involved in gastrulation. Located in cytoplasm. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F44F1.7
    Corresponding_transcript: F44F1.7.1
    Other_sequence: FG620562.1
    Associated_feature: WBsf643794
      WBsf985809
      WBsf218706
  Experimental_info: RNAi_result: WBRNAi00014950 Inferred_automatically: RNAi_primary
      WBRNAi00093883 Inferred_automatically: RNAi_primary
      WBRNAi00047314 Inferred_automatically: RNAi_primary
      WBRNAi00093938 Inferred_automatically: RNAi_primary
      WBRNAi00032254 Inferred_automatically: RNAi_primary
      WBRNAi00093954 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1021307
      Expr1032926
      Expr1151166
      Expr2017972
      Expr2036108
    Drives_construct: WBCnstr00034105
    Construct_product: WBCnstr00018445
      WBCnstr00034105
    Microarray_results (18)
    Expression_cluster (193)
    Interaction (61)
  Map_info: Map: I Position: 17.3475 Error: 0.030561
    Positive: Positive_clone: BW#104
        F44F1 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 5071
    Pseudo_map_position
  Reference: WBPaper00002526
    WBPaper00002567
    WBPaper00014776
    WBPaper00015183
    WBPaper00032509
    WBPaper00038341
    WBPaper00056814
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene