WormBase Tree Display for Gene: WBGene00006861
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| WBGene00006861 | SMap | S_parent | Sequence | C24H10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cal-5 | Person_evidence | WBPerson261 | |||||
| WBPerson71 | |||||||||
| Sequence_name | C24H10.5 | ||||||||
| Molecular_name | C24H10.5 | ||||||||
| C24H10.5.1 | |||||||||
| CE29674 | |||||||||
| Other_name | uvt-2 | Person_evidence | WBPerson71 | ||||||
| CELE_C24H10.5 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | cal-5 | ||||||||
| DB_info | Database | AceView | gene | XF690 | |||||
| WormQTL | gene | WBGene00006861 | |||||||
| WormFlux | gene | WBGene00006861 | |||||||
| NDB | locus_tag | CELE_C24H10.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006861|UniProtKB=Q18136 | |||||||
| family | PTHR23050 | ||||||||
| NCBI | gene | 192083 | |||||||
| RefSeq | protein | NM_076463.10 | |||||||
| TREEFAM | TREEFAM_ID | TF318191 | |||||||
| TrEMBL | UniProtAcc | Q18136 | |||||||
| UniProt_GCRP | UniProtAcc | Q18136 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 26 Sep 2008 15:49:39 | WBPerson2970 | Name_change | CGC_name | cal-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cal | ||||||||
| Allele (73) | |||||||||
| Legacy_information | are transcript present in larvae adult hermaphrodites. | ||||||||
| [C.elegansII] NMK. Rare 1,3 kb transcript present in larvae, adult hermaphrodites. [Heine and Blumenthal 1986] | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00060268 | ||||||||
| 00114937 | |||||||||
| Ortholog (40) | |||||||||
| Paralog (18) | |||||||||
| Structured_description | Concise_description | uvt-2 encodes a protein that contains four EF-hand calcium binding motifs with similarity to human calmodulin; mRNA weakly expressed in L1 through L4 larval stages and in the adult hermaphrodite. | Paper_evidence | WBPaper00000873 | |||||
| Curator_confirmed | WBPerson48 | ||||||||
| Date_last_updated | 14 Feb 2005 00:00:00 | ||||||||
| Automated_description | Predicted to enable calcium ion binding activity. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C24H10.5 | |||||||
| Corresponding_transcript | C24H10.5.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf653952 | ||||||||
| WBsf670504 | |||||||||
| WBsf670505 | |||||||||
| WBsf1005171 | |||||||||
| WBsf1005172 | |||||||||
| WBsf1022908 | |||||||||
| WBsf237345 | |||||||||
| WBsf237346 | |||||||||
| WBsf237347 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029160 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00041115 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1238 | ||||||||
| Expr1018404 | |||||||||
| Expr1032906 | |||||||||
| Expr1145148 | |||||||||
| Expr2009705 | |||||||||
| Expr2027944 | |||||||||
| Drives_construct | WBCnstr00037884 | ||||||||
| Construct_product | WBCnstr00037884 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (176) | |||||||||
| Interaction | WBInteraction000566171 | ||||||||
| Map_info | Map | X | Position | -6.19642 | |||||
| Positive | Positive_clone | C24H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00000873 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00050050 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map X | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
