WormBase Tree Display for Gene: WBGene00006839

WBGene00006839 SMap: S_parent: Sequence: F09B9
  Identity: Version: 1
    Name: CGC_name: unc-115 Person_evidence: WBPerson261
      Sequence_name: F09B9.2
      Molecular_name: F09B9.2a
        F09B9.2a.1
        CE15759
        F09B9.2b
        CE02176
        F09B9.2b.1
      Other_name: CELE_F09B9.2 Accession_evidence: NDB BX284606
      Public_name: unc-115
    DB_info: Database: AceView gene XK771
        WormQTL gene WBGene00006839
        WormFlux gene WBGene00006839
        NDB locus_tag CELE_F09B9.2
        Panther gene CAEEL|WormBase=WBGene00006839|UniProtKB=Q95QM5
          family PTHR24213
        NCBI gene 181227
        RefSeq protein NM_077301.9
            NM_001029371.8
        TREEFAM TREEFAM_ID TF318042
        TrEMBL UniProtAcc Q95QM5
            Q19240
        UniProt_GCRP UniProtAcc Q95QM5
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:43 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: unc
    Allele (111)
    Legacy_information: See also e2225
      [C.elegansII] e2225mut : uncoordinated movement, severe kinker. Muscle structure appears normal. OA1: mn481. Cloned: predicted protein has N-term LIMb domain, C-term villin headpiece similarity. [FF; SP]
    Strain: WBStrain00003646
      WBStrain00027092
      WBStrain00030542
      WBStrain00034392
      WBStrain00034399
      WBStrain00037520
      WBStrain00005032
      WBStrain00005254
    RNASeq_FPKM (74)
    GO_annotation (16)
    Ortholog: WBGene00063125 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00036883 Caenorhabditis briggsae From_analysis: Hillier-set
            OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00145068 Caenorhabditis brenneri From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00108280 Pristionchus pacificus From_analysis: OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00131837 Caenorhabditis japonica From_analysis: OMA
            TreeFam
            Inparanoid_8
            WormBase-Compara
      CBOVI.g2923 Caenorhabditis bovis From_analysis: WormBase-Compara
      CBOVI.g2924 Caenorhabditis bovis From_analysis: WormBase-Compara
      CSP26.g8662 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP28.g17564 Caenorhabditis panamensis From_analysis: WormBase-Compara
      CSP29.g16076 Caenorhabditis becei From_analysis: WormBase-Compara
      CSP31.g25090 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP32.g12721 Caenorhabditis sulstoni From_analysis: WormBase-Compara
      CSP38.g1837 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      CSP39.g27386 Caenorhabditis waitukubuli From_analysis: WormBase-Compara
      CSP40.g15896 Caenorhabditis tribulationis From_analysis: WormBase-Compara
      Cang_2012_03_13_00262.g8066 Caenorhabditis angaria From_analysis: WormBase-Compara
      Cni-unc-115 Caenorhabditis nigoni From_analysis: WormBase-Compara
      Csp11.Scaffold629.g13685 Caenorhabditis tropicalis From_analysis: WormBase-Compara
      Csp5_scaffold_00352.g9949 Caenorhabditis sinica From_analysis: WormBase-Compara
      FL83_01376 Caenorhabditis latens From_analysis: WormBase-Compara
      GCK72_023530 Caenorhabditis remanei From_analysis: WormBase-Compara
      OTIPU.nOt.2.0.1.g07537 Oscheius tipulae From_analysis: WormBase-Compara
      Sp34_X0066500 Caenorhabditis inopinata From_analysis: WormBase-Compara
      chrX_pilon.g19857 Caenorhabditis elegans From_analysis: WormBase-Compara
      FB:FBgn0260463 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      FB:FBgn0051352 Drosophila melanogaster From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-050327-91 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-070112-1122 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-100316-5 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      ZFIN:ZDB-GENE-080219-41 Danio rerio From_analysis: Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            SonicParanoid
      HGNC:78 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:29132 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      HGNC:19195 Homo sapiens From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:1194500 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2385758 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OMA
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
      MGI:2442582 Mus musculus From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1565118 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            SonicParanoid
      RGD:1565768 Rattus norvegicus From_analysis: Hieranoid
            OMA
            PhylomeDB
      RGD:1303094 Rattus norvegicus From_analysis: Hieranoid
            Inparanoid
            OrthoFinder
            OrthoInspector
            Panther
            PhylomeDB
            SonicParanoid
    Structured_description: Concise_description: unc-115 encodes a protein that binds actin filaments and that is required for RAS signalling and UNC-40/netrin activity during axon pathfinding. Paper_evidence: WBPaper00005607
            WBPaper00005719
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enables actin filament binding activity. Involved in neuron projection morphogenesis; regulation of filopodium assembly; and regulation of lamellipodium assembly. Located in basal plasma membrane and cytoplasm. Expressed in several structures, including PDE; excretory cell; pharynx; somatic nervous system; and vulva. Is an ortholog of human ABLIM2 (actin binding LIM protein family member 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F09B9.2a
      F09B9.2b
    Corresponding_transcript: F09B9.2a.1
      F09B9.2b.1
    Other_sequence (45)
    Associated_feature (16)
    Transcription_factor: WBTranscriptionFactor000712
  Experimental_info: RNAi_result (17)
    Expr_pattern (11)
    Drives_construct (12)
    Construct_product: WBCnstr00007698
      WBCnstr00018995
      WBCnstr00020818
      WBCnstr00034126
    Antibody: WBAntibody00001164
    Microarray_results (29)
    Expression_cluster (186)
    Interaction (85)
    Anatomy_function: WBbtf0223
  Map_info: Map: X Position: 1.86244 Error: 0.006291
    Well_ordered
    Positive: Positive_clone: F09B9 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: 2_point: 3647
        3648
        3654
        3657
        3660
        3662
        3666
        6011
        7020
        7022
      Multi_point (31)
      Pos_neg_data: 3650
        3665
        6695
  Reference (76)
  Method: Gene