WormBase Tree Display for Gene: WBGene00006818
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WBGene00006818 | SMap | S_parent | Sequence | C30A5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | unc-86 | Person_evidence | WBPerson261 | |||||
Sequence_name | C30A5.7 | ||||||||
Molecular_name | C30A5.7a | ||||||||
C30A5.7a.1 | |||||||||
CE51471 | |||||||||
C30A5.7b | |||||||||
CE45067 | |||||||||
C30A5.7b.1 | |||||||||
Other_name | CELE_C30A5.7 | Accession_evidence | NDB | BX284603 | |||||
Public_name | unc-86 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | unc | ||||||||
Reference_allele | WBVar00143991 | ||||||||
Allele (87) | |||||||||
Legacy_information | e1416 : lethargic; Mec (touch cells absent); Egl (HSN cells fail to differentiate); non-chemotactic to NaCl; lineage abnormalities involving reiterative divisions of neuroblasts hence supernumerary neurons and missing neurons; 2% Him. ES3 ME2. NA > 30 (e1507 (Mec Egl non-Him ME3); n848ts (superficially wildtype at 20x Mec and Egl at 25x) etc.). Alleles form graded series; e1416/Df is ME0; null phenotype uncertain. | ||||||||
See also e1416, e1507, n306, n364, n365, n366, n367, n412, n413, n414, n843, n844, n845, n846, n847, n848, n946, n992, n993, n994, n1041, n1042, n1071, n1132 | |||||||||
[C.elegansII] eDf25 : pka e1416, lethargic; Mec (touch cells absent); Egl (HSN cells fail to differentiate); non-chemotactic to NaCl; lineage abnormalities involving reiterative divisions of neuroblasts, hence supernumerary neurons and missing neurons; 2% Him. ES3 ME2. OA>30: e1507 (Mec, Egl, non-Him, ME3). n848ts (superficially wildtype at 20C, Mec and Egl at 25C), n306, n1132, n846 (amorph),u371::Tc3, rh1029::Tc3, n1351::Tc4, etc. Alleles form graded series; e1416/Df is ME0; Him alleles (e1416, n303 etc. are deletions of >15kb, affecting both unc-86 and him-15. Cloned: rare 1.9 kb transcript, encodes 467 aa POU-class homeoprotein. Antibody staining indicates UNC-86 nuclear, specific to daughter nuclei affected by unc-86 mutations. Extensive promoter analysis. See also him-15. [Chalfie et al. 1981; Finney et al. 1988; Finney and Ruvkun 1990; GR] | |||||||||
Strain (19) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (39) | |||||||||
Ortholog (43) | |||||||||
Paralog | WBGene00000431 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00000441 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description (2) | |||||||||
Disease_info | Potential_model | DOID:0110546 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:9220) | ||||
Molecular_info | Corresponding_CDS | C30A5.7a | |||||||
C30A5.7b | |||||||||
Corresponding_CDS_history | C30A5.7a:wp215 | ||||||||
C30A5.7a:wp252 | |||||||||
C30A5.7b:wp215 | |||||||||
Corresponding_transcript | C30A5.7a.1 | ||||||||
C30A5.7b.1 | |||||||||
Other_sequence | Acan_isotig06105 | ||||||||
Dviv_isotig17894 | |||||||||
Oden_isotig25490 | |||||||||
Oden_isotig25565 | |||||||||
Dviv_isotig17893 | |||||||||
Acan_isotig06104 | |||||||||
Dviv_isotig21248 | |||||||||
XIC02391_1 | |||||||||
XI03029 | |||||||||
JI170316.1 | |||||||||
Associated_feature (11) | |||||||||
Gene_product_binds (27) | |||||||||
Transcription_factor | WBTranscriptionFactor000094 | ||||||||
WBTranscriptionFactor000756 | |||||||||
Experimental_info | RNAi_result (13) | ||||||||
Expr_pattern (17) | |||||||||
Drives_construct (69) | |||||||||
Construct_product | WBCnstr00009234 | ||||||||
WBCnstr00012370 | |||||||||
WBCnstr00012378 | |||||||||
WBCnstr00012384 | |||||||||
WBCnstr00017076 | |||||||||
WBCnstr00020286 | |||||||||
WBCnstr00021911 | |||||||||
WBCnstr00021913 | |||||||||
WBCnstr00034138 | |||||||||
Antibody | WBAntibody00000047 | ||||||||
WBAntibody00001505 | |||||||||
WBAntibody00001536 | |||||||||
WBAntibody00001542 | |||||||||
WBAntibody00001838 | |||||||||
Microarray_results (24) | |||||||||
Expression_cluster (209) | |||||||||
Interaction (178) | |||||||||
Map_info | Map | III | Position | -0.362585 | Error | 0.002397 | |||
Well_ordered | |||||||||
Positive | Inside_rearr | nDf16 | |||||||
nDf20 | |||||||||
Positive_clone | AA1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
C30A5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||||
Mapping_data | 2_point | 66 | |||||||
85 | |||||||||
3799 | |||||||||
Multi_point (49) | |||||||||
Pos_neg_data | 361 | ||||||||
808 | |||||||||
811 | |||||||||
3804 | |||||||||
3808 | |||||||||
6105 | |||||||||
6107 | |||||||||
800 | |||||||||
10771 | |||||||||
Reference (275) | |||||||||
Method | Gene |