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WormBase Tree Display for Gene: WBGene00006802

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Name Class

WBGene00006802SMapS_parentSequenceT07A5
IdentityVersion2
NameCGC_nameunc-69Paper_evidenceWBPaper00027646
Person_evidenceWBPerson261
Sequence_nameT07A5.6
Molecular_nameT07A5.6a
T07A5.6a.1
CE23955
T07A5.6b
CE38102
T07A5.6c
CE41450
T07A5.6b.1
T07A5.6c.1
Other_nameCELE_T07A5.6Accession_evidenceNDBBX284603
Public_nameunc-69
DB_infoDatabaseAceViewgene3L409
WormFluxgeneWBGene00006802
NDBlocus_tagCELE_T07A5.6
PanthergeneCAEEL|WormBase=WBGene00006802|UniProtKB=A7LPF8
familyPTHR21614
NCBIgene176444
RefSeqproteinNM_001027582.4
NM_001027581.5
NM_001129245.5
TREEFAMTREEFAM_IDTF323340
TrEMBLUniProtAccA7LPF8
Q9U377
G5EDQ5
UniProt_GCRPUniProtAccA7LPF8
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:43WBPerson1971EventImportedInitial conversion from geneace
230 Oct 2007 10:02:14WBPerson2970EventAcquires_mergeWBGene00044098
Name_changeSequence_nameT07A5.6
Acquires_mergeWBGene00044098
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classunc
Reference_alleleWBVar00143321
Allele (18)
Legacy_informatione587 : medium coiler inactive small; abnormalities in VD and DD commissures. ES3 ME0. NA2 (e602).
[C.elegansII] e587 : medium coiler, inactive, small; abnormalities in VD and DD commissures, longitudinal axon elongation. ES3 ME0. OA1: e602. Cloned: cosmid rescue (C46D2). [Brenner 1974; NG; SQ; WS]
Strain (16)
RNASeq_FPKM (74)
GO_annotation00005135
00005136
00005137
00005138
00005139
00005140
00005141
00005142
00005143
OrthologWBGene00042681Caenorhabditis briggsaeFrom_analysisOrthoMCL
OMA
Inparanoid_8
WormBase-Compara
WBGene00055730Caenorhabditis remaneiFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00161369Caenorhabditis brenneriFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00109470Pristionchus pacificusFrom_analysisOMA
Inparanoid_8
WormBase-Compara
WBGene00120626Caenorhabditis japonicaFrom_analysisOMA
TreeFam
Inparanoid_8
WormBase-Compara
WBGene00217114Caenorhabditis japonicaFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00225889Brugia malayiFrom_analysisWormBase-Compara
CBOVI.g4327Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g7270Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g14955Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g9527Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g15240Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g2661Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g15889Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g3087Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g22519Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g476Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_00280.g8411Caenorhabditis angariaFrom_analysisWormBase-Compara
Cni-unc-69Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold628.g7395Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_00332.g9569Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_13494Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_010498Caenorhabditis remaneiFrom_analysisWormBase-Compara
OTIPU.nOt.2.0.1.g08111Oscheius tipulaeFrom_analysisWormBase-Compara
Pan_g22478Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30119300Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g8843Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00245979Onchocerca volvulusFrom_analysisWormBase-Compara
WBGene00258941Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00293073Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0039505Drosophila melanogasterFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-061013-114Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
ZFIN:ZDB-GENE-041010-41Danio rerioFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
HGNC:20335Homo sapiensFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
MGI:1927654Mus musculusFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
RGD:1311860Rattus norvegicusFrom_analysisEnsEMBL-Compara
Hieranoid
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
Structured_descriptionConcise_descriptionunc-69 encodes, by alternative splicing, three isoforms of a small (102- to 176-residue) coiled-coil protein required for normal axonal extension, axonal guidance, neuronal fasciculation, and synaptic vesicle localization; UNC-69 is orthologous to human SCOCO, which can transgenically rescue the locomotion defect of strong unc-69 mutants; UNC-69 is expressed in embryos, the processes and growth cones of immature neurons, and in the cell bodies of many (perhaps all) mature neurons; UNC-69 acts cell-autonomously in at least touch neurons, and perhaps all neurons; since UNC-69 binds a 19-residue conserved coiled-coil domain of UNC-76, UNC-69 and UNC-76 colocalize to neuronal puncta, unc-69 mutants phenotypically resemble unc-76, and mutations of these genes have nonallelic noncomplementation, UNC-69 and UNC-76 are likely to function as a complex.Paper_evidenceWBPaper00000031
WBPaper00001345
WBPaper00002837
WBPaper00027646
WBPaper00027651
WBPaper00031100
Curator_confirmedWBPerson1843
WBPerson567
Date_last_updated18 Oct 2007 00:00:00
Automated_descriptionInvolved in regulation of axon extension and regulation of synapse organization. Located in axon; neuronal cell body; and perinuclear region of cytoplasm. Expressed in CAN; HSN; ganglia; somatic nervous system; and touch receptor neurons. Is an ortholog of human SCOC (short coiled-coil protein).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDST07A5.6a
T07A5.6b
T07A5.6c
Corresponding_transcriptT07A5.6a.1
T07A5.6b.1
T07A5.6c.1
Other_sequence (59)
Associated_feature (12)
Experimental_infoRNAi_resultWBRNAi00035291Inferred_automaticallyRNAi_primary
WBRNAi00062360Inferred_automaticallyRNAi_primary
Expr_patternExpr4900
Expr7838
Expr1016022
Expr1032870
Expr1156304
Expr2017899
Expr2036035
Drives_constructWBCnstr00001400
WBCnstr00012320
WBCnstr00012950
Construct_productWBCnstr00001400
WBCnstr00012320
WBCnstr00012950
Microarray_results (25)
Expression_cluster (123)
InteractionWBInteraction000008990
WBInteraction000522715
WBInteraction000522716
WBInteraction000547046
Map_infoMapIIIPosition2.3102Error0.00237
Well_ordered
PositiveInside_rearrnDf40
Positive_cloneT07A5Inferred_automaticallyFrom sequence, transcript, pseudogene data
NegativeOutside_rearrtnDf2
Mapping_data2_point72
578
702
5137
6121
Multi_point (75)
Pos_neg_data362
669
1597
1620
4768
8638
9454
10533
Reference (52)
Remarkon same cosmid as unc-50; genetic map data indicate unc-69 left of unc-50 JAH 01/01
MethodGene