WormBase Tree Display for Gene: WBGene00006736
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| WBGene00006736 | Evidence | Person_evidence | WBPerson2549 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson6733 | |||||||||
| SMap | S_parent | Sequence | T10F2 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | ulp-1 | |||||||
| Sequence_name | T10F2.3 | ||||||||
| Molecular_name | T10F2.3 | ||||||||
| T10F2.3.1 | |||||||||
| CE33694 | |||||||||
| Other_name | CELE_T10F2.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ulp-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ulp | ||||||||
| Allele (46) | |||||||||
| Strain | WBStrain00032197 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Contained_in_operon | CEOP3260 | ||||||||
| Ortholog (41) | |||||||||
| Structured_description | Concise_description | ulp-1 encodes a SUMO protease; by homology, ULP-1 is predicted to function in removal of SUMO ubiquitin-like molecules from tagged proteins; expression of a chimeric SOP-2::GFP::ULP-1 protein results in aberrant localization of SOP-2, suggesting that: 1) ULP-1 functions in vivo to remove SUMO moieties from SOP-2 and 2) sumoylation is important for SOP-2 localization to nuclear bodies. | Paper_evidence | WBPaper00006514 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 20 Aug 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable deSUMOylase activity. Involved in several processes, including embryo development; positive regulation of error-prone translesion synthesis; and protein desumoylation. Predicted to be located in nucleus. Is an ortholog of human SENP2 (SUMO specific peptidase 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10F2.3 | |||||||
| Corresponding_CDS_history | T10F2.3:wp88 | ||||||||
| T10F2.3:wp97 | |||||||||
| Corresponding_transcript | T10F2.3.1 | ||||||||
| Other_sequence | SRC09838_1 | ||||||||
| FC813527.1 | |||||||||
| CRC04439_1 | |||||||||
| Hbac_isotig03155 | |||||||||
| Dviv_isotig16384 | |||||||||
| MH06843 | |||||||||
| JI167232.1 | |||||||||
| CR10555 | |||||||||
| Associated_feature | WBsf651033 | ||||||||
| WBsf666896 | |||||||||
| WBsf666897 | |||||||||
| WBsf226644 | |||||||||
| Experimental_info | RNAi_result (14) | ||||||||
| Expr_pattern | Expr1027777 | ||||||||
| Expr1032811 | |||||||||
| Expr1156669 | |||||||||
| Expr2017826 | |||||||||
| Expr2035962 | |||||||||
| Drives_construct | WBCnstr00034184 | ||||||||
| Construct_product | WBCnstr00034184 | ||||||||
| Antibody | WBAntibody00002843 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction (38) | |||||||||
| Map_info | Map | III | Position | -2.04308 | Error | 0.001683 | |||
| Positive | Positive_clone | T10F2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006514 | ||||||||
| WBPaper00028564 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00038669 | |||||||||
| WBPaper00041255 | |||||||||
| WBPaper00046087 | |||||||||
| WBPaper00046470 | |||||||||
| WBPaper00047612 | |||||||||
| WBPaper00051665 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00055134 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
