WormBase Tree Display for Gene: WBGene00006715
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| WBGene00006715 | SMap | S_parent | Sequence | F40G9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | ubc-20 | Person_evidence | WBPerson89 | |||||
| Sequence_name | F40G9.3 | ||||||||
| Molecular_name | F40G9.3 | ||||||||
| F40G9.3.1 | |||||||||
| CE19850 | |||||||||
| Other_name | CELE_F40G9.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | ubc-20 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ubc | ||||||||
| Allele (82) | |||||||||
| Strain | WBStrain00002957 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00097844 | ||||||||
| 00097845 | |||||||||
| 00097846 | |||||||||
| 00097847 | |||||||||
| 00097848 | |||||||||
| 00097849 | |||||||||
| 00097850 | |||||||||
| 00097851 | |||||||||
| 00097852 | |||||||||
| Contained_in_operon | CEOP3016 | ||||||||
| Ortholog (30) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Automated_description | Predicted to enable ubiquitin conjugating enzyme activity. Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process and protein polyubiquitination. Predicted to be located in nucleus. Is an ortholog of human UBE2K (ubiquitin conjugating enzyme E2 K). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40G9.3 | |||||||
| Corresponding_transcript | F40G9.3.1 | ||||||||
| Other_sequence (56) | |||||||||
| Associated_feature | WBsf644906 | ||||||||
| WBsf658543 | |||||||||
| WBsf991002 | |||||||||
| WBsf1014024 | |||||||||
| WBsf224344 | |||||||||
| WBsf224345 | |||||||||
| WBsf224346 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr6019 | ||||||||
| Expr1010829 | |||||||||
| Expr1032798 | |||||||||
| Expr1150780 | |||||||||
| Expr2017707 | |||||||||
| Expr2035845 | |||||||||
| Drives_construct | WBCnstr00003463 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (88) | |||||||||
| Interaction (109) | |||||||||
| Map_info | Map | III | Position | -26.9218 | Error | 0.00178 | |||
| Positive | Positive_clone | F40G9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference (12) | |||||||||
| Remark | Sequence connection from [Jones D, Crowe E, Stevens TA, Candido EPM], 02/06/10 krb. | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
