WormBase Tree Display for CDS: F40G9.3
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| F40G9.3 | Evidence | Inferred_automatically | make_isoforms.pl | |||
|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | F40G9 | |||
| Structure | Source_exons | 1 | 120 | |||
| 173 | 268 | |||||
| 336 | 418 | |||||
| 475 | 601 | |||||
| 1562 | 1735 | |||||
| DB_info | Database | KEGG | KEGG_id | 2.3.2.23 | ||
| TrEMBL | UniProtAcc | Q9TZ69 | ||||
| UniProt | UniProtAcc | Q9TZ69 | ||||
| UniProt_GCRP | UniProtAcc | Q9TZ69 | ||||
| AlphaFold | entry | Q9TZ69 | ||||
| NCBI_protein | GI_number | GI:351062892 | ||||
| TREEFAM | TREEFAM_ID | TF101127 | ||||
| Protein_id | CHROMOSOME_III | CCD70929 | 1 | |||
| DB_remark | UBC-20 protein; contains similarity to Pfam domain PF00179 (Ubiquitin-conjugating enzyme); contains similarity to Interpro domains IPR000608 (Ubiquitin-conjugating enzyme E2), IPR009060 (UBA-like superfamily), IPR016135 (Ubiquitin-conjugating enzyme/RWD-like) | |||||
| Origin | From_laboratory | RW | ||||
| Species | Caenorhabditis elegans | |||||
| Properties | Coding | CDS | ||||
| Prediction_status | Partially_confirmed | |||||
| Visible | Gene | WBGene00006715 | ||||
| Corresponding_transcript | F40G9.3.1 | |||||
| Corresponding_protein | CE19850 | |||||
| Corresponding_PCR_product | TH:329B1 | |||||
| TH:338E2 | ||||||
| cenix:329-b1 | ||||||
| cenix:338-e2 | ||||||
| mv_F40G9.3 | ||||||
| sjj_F40G9.3 | ||||||
| Corresponding_oligo_set (14) | ||||||
| Matching_cDNA (50) | ||||||
| RNAi_result (16) | ||||||
| Microarray_results (15) | ||||||
| Brief_identification | E2 ubiquitin-conjugating enzyme | Accession_evidence | UniProt | TR:Q9TZ69 | ||
| RNASeq_FPKM (74) | ||||||
| Associated_feature | WBsf001333 | |||||
| Method | curated |
