WormBase Tree Display for Gene: WBGene00006668
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| WBGene00006668 | Evidence | Person_evidence | WBPerson655 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | R04F11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | twk-13 | Person_evidence | WBPerson655 | |||||
| Sequence_name | R04F11.4 | ||||||||
| Molecular_name (12) | |||||||||
| Other_name | twk-15 | Person_evidence | WBPerson655 | ||||||
| CELE_R04F11.4 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | twk-13 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00006668 | |||||
| WormFlux | gene | WBGene00006668 | |||||||
| NDB | locus_tag | CELE_R04F11.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006668|UniProtKB=B0M0M8 | |||||||
| family | PTHR11003 | ||||||||
| NCBI | gene | 192077 | |||||||
| RefSeq | protein | NM_001276940.3 | |||||||
| NM_001276939.4 | |||||||||
| NM_073690.10 | |||||||||
| NM_001129512.4 | |||||||||
| TrEMBL | UniProtAcc | K8ESB6 | |||||||
| B0M0M8 | |||||||||
| Q21729 | |||||||||
| K8F7Q8 | |||||||||
| UniProt_GCRP | UniProtAcc | B0M0M8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | twk | ||||||||
| Allele (228) | |||||||||
| Legacy_information | [Thomas JH] twk for potassium channel family, type Twik (double P domain) | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (39) | |||||||||
| Paralog (47) | |||||||||
| Structured_description | Concise_description | twk-13 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains; as loss of TWK-13 function via RNA-mediated interference (RNAi) does not result in any abnormalities, the precise role of TWK-13 in C. elegans development and/or behavior is not yet known; however, TWK-13 likely functions redundantly with other TWK channels; the TWK-13 expression pattern has not been determined. | Paper_evidence | WBPaper00004644 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable outward rectifier potassium channel activity and potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to be located in membrane. Expressed in cholinergic neurons and ventral cord neurons. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R04F11.4a | |||||||
| R04F11.4b | |||||||||
| R04F11.4c | |||||||||
| R04F11.4d | |||||||||
| Corresponding_CDS_history | R04F11.4:wp77 | ||||||||
| Corresponding_transcript | R04F11.4a.1 | ||||||||
| R04F11.4b.1 | |||||||||
| R04F11.4c.1 | |||||||||
| R04F11.4d.1 | |||||||||
| Other_sequence | CJC02199_1 | ||||||||
| MH08692 | |||||||||
| Dviv_isotig16198 | |||||||||
| JI175501.1 | |||||||||
| Dviv_isotig16199 | |||||||||
| JI214194.1 | |||||||||
| CR06151 | |||||||||
| CRC03257_1 | |||||||||
| Associated_feature (16) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051252 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017414 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051253 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00092869 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr9868 | ||||||||
| Expr1018879 | |||||||||
| Expr1032769 | |||||||||
| Expr1154954 | |||||||||
| Expr2017641 | |||||||||
| Expr2035781 | |||||||||
| Drives_construct | WBCnstr00009852 | ||||||||
| WBCnstr00034228 | |||||||||
| Construct_product | WBCnstr00034228 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (171) | |||||||||
| Interaction (104) | |||||||||
| Map_info | Map | V | Position | 3.99986 | Error | 0.000794 | |||
| Positive | Positive_clone | M04B2 | |||||||
| R04F11 | Person_evidence | WBPerson654 | |||||||
| WBPerson655 | |||||||||
| Inferred_automatically | From sequence, transcript, pseudogene data | ||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041549 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | twk-13 was connected to M04B2.5 | Person_evidence | WBPerson655 | ||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
