WormBase Tree Display for Gene: WBGene00006635
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| WBGene00006635 | SMap | S_parent | Sequence | C25G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | tsp-9 | Person_evidence | WBPerson522 | |||||
| Sequence_name | C25G6.2 | ||||||||
| Molecular_name | C25G6.2 | ||||||||
| C25G6.2.1 | |||||||||
| CE04083 | |||||||||
| Other_name | CELE_C25G6.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | tsp-9 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tsp | ||||||||
| Allele (28) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00060384 | ||||||||
| 00060385 | |||||||||
| 00060386 | |||||||||
| 00114526 | |||||||||
| Ortholog (35) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Human ortholog(s) of this gene implicated in common variable immunodeficiency 6. Is an ortholog of human CD81 (CD81 molecule). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0081149 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:1701) | ||||
| Molecular_info | Corresponding_CDS | C25G6.2 | |||||||
| Corresponding_transcript | C25G6.2.1 | ||||||||
| Other_sequence (28) | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00029207 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011185 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011187 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00041219 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011481 | ||||||||
| Expr1032754 | |||||||||
| Expr1145255 | |||||||||
| Expr2017559 | |||||||||
| Expr2035697 | |||||||||
| Drives_construct | WBCnstr00034250 | ||||||||
| Construct_product | WBCnstr00034250 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction | WBInteraction000279378 | ||||||||
| WBInteraction000339888 | |||||||||
| WBInteraction000340249 | |||||||||
| WBInteraction000344696 | |||||||||
| WBInteraction000349971 | |||||||||
| WBInteraction000377986 | |||||||||
| WBInteraction000440448 | |||||||||
| Map_info | Map | X | Position | -18.476 | Error | 0.00321 | |||
| Positive | Positive_clone | C25G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5551 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
