WormBase Tree Display for Gene: WBGene00006634
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WBGene00006634 | SMap | S_parent | Sequence | F33C8 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | tsp-8 | Person_evidence | WBPerson522 | |||||
Sequence_name | F33C8.3 | ||||||||
Molecular_name | F33C8.3 | ||||||||
F33C8.3.1 | |||||||||
CE05798 | |||||||||
Other_name | CELE_F33C8.3 | Accession_evidence | NDB | BX284606 | |||||
Public_name | tsp-8 | ||||||||
DB_info | Database | AceView | gene | XP346 | |||||
WormQTL | gene | WBGene00006634 | |||||||
WormFlux | gene | WBGene00006634 | |||||||
NDB | locus_tag | CELE_F33C8.3 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006634|UniProtKB=Q19983 | |||||||
family | PTHR19282 | ||||||||
NCBI | gene | 181567 | |||||||
RefSeq | protein | NM_078044.7 | |||||||
TrEMBL | UniProtAcc | Q19983 | |||||||
UniProt_GCRP | UniProtAcc | Q19983 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tsp | ||||||||
Allele (73) | |||||||||
Strain | WBStrain00001755 | ||||||||
WBStrain00024032 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00066602 | ||||||||
00066603 | |||||||||
00066604 | |||||||||
00114525 | |||||||||
Ortholog (28) | |||||||||
Paralog (20) | |||||||||
Structured_description | Concise_description | tsp-8 is orthologous to the human gene KANGAI 1 (SUPPRESSION OF TUMORIGENICITY 6, PROSTATE; CD82 ANTIGEN (R2 LEUKOCYTE ANTIGEN, ANTIGEN DETECTED BY MONOCLONAL AND ANTIBODY IA4)) (KAI1; OMIM:600623), which when mutated leads to disease. | Curator_confirmed | WBPerson1823 | |||||
WBPerson567 | |||||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F33C8.3 | |||||||
Corresponding_transcript | F33C8.3.1 | ||||||||
Other_sequence (22) | |||||||||
Associated_feature | WBsf654596 | ||||||||
WBsf671290 | |||||||||
WBsf1007987 | |||||||||
WBsf1007988 | |||||||||
WBsf1007989 | |||||||||
WBsf1024453 | |||||||||
WBsf1024454 | |||||||||
WBsf238247 | |||||||||
Experimental_info | RNAi_result | WBRNAi00109342 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00109245 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00109536 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00109439 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000499 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00109633 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00031710 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00046187 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1558 | ||||||||
Expr5941 | |||||||||
Expr1012916 | |||||||||
Expr1150075 | |||||||||
Expr2017558 | |||||||||
Expr2035696 | |||||||||
Drives_construct | WBCnstr00002570 | ||||||||
WBCnstr00034251 | |||||||||
Construct_product | WBCnstr00034251 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (173) | |||||||||
Interaction (17) | |||||||||
Map_info | Map | X | Position | 20.6661 | Error | 0.26441 | |||
Positive | Positive_clone | F33C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Mapping_data | Multi_point | 4742 | |||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |